Sphingobium sp. SYK-6: SLG_p_00980
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Entry
SLG_p_00980 CDS
T01622
Name
(GenBank) LuxR family transcriptional regulator
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLG_p_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssy03000
]
SLG_p_00980
Transcription factors [BR:
ssy03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SLG_p_00980
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Paralog
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GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4
HTH_23
Pkinase
Motif
Other DBs
NCBI-ProteinID:
BAK68686
UniProt:
G2IU11
LinkDB
All DBs
Position
pSLPG:93534..94280
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AA seq
248 aa
AA seq
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MMIGLGQVQDFCAVAGAIKDATALSDLMAEITKAMGFRHYALVHHVDLKPAVRSVHIVDY
PQDWVERFQARRLYASDPIHRASHRTNVGFAWSAVQSIISLTAADRSILAEAYEAGLGDG
FTVPAHIPGELNGSCSFAMAAGEMLDHRQLPFVQLVGSFAFEAARKISRIHAPQSECPSL
TERQAECVALVARGKTDWEISQILGIGQETVIQHVKDARDRYGVTKRTLLAIRALFEGQI
SFADVFGR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgggcttgggcaagttcaggatttctgcgctgtcgctggcgcgatcaaggac
gctacggccttgtctgacctgatggccgaaatcacgaaggccatgggctttcggcactat
gccctggtccatcatgtcgacctgaagcctgcggttcgctcggtccacatcgtcgactat
ccgcaagactgggtggagcgcttccaggcgagacgcctctatgcgagcgacccgatccac
cgcgccagccatcgcaccaatgtgggctttgcctggtcggcggttcagtcgatcatctct
ctgacggccgccgatcgctcgatcctggcagaagcctacgaggccgggctgggcgacggc
ttcaccgttccggcccatattcctggcgagctcaatggatcctgttccttcgcgatggcg
gcgggcgagatgctcgaccatcggcagctgccgttcgtgcagctcgtcggcagcttcgcg
ttcgaagcggcacgcaagatttcccggatccacgcgccgcaatccgaatgcccgagcctg
accgaaaggcaggccgaatgcgtggcgctggtcgcgcggggcaagaccgattgggagatc
agccagatcctcggcatcggccaggaaacggtgatccagcatgtgaaggatgcgcgcgac
cgctatggcgtcaccaagcgcaccctcctcgccattcgcgccttgttcgaagggcaaatc
agctttgccgatgtgttcggccgatga
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