Saccharothrix syringae: EKG83_00020
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Entry
EKG83_00020 CDS
T06258
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKG83_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyi03400
]
EKG83_00020 (recF)
DNA repair and recombination proteins [BR:
ssyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EKG83_00020 (recF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QFZ16063
UniProt:
A0A5Q0GQ52
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Position
4973..6088
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AA seq
371 aa
AA seq
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MYVRHLQVTDFRSWEHADLAFEPGVSVLVGRNGQGKTNLVEALGYVATLGSHRVATDAPL
VRHGAPRAVVRAAVVNDGRELLVELEITPGRANRARVNRGPVPRPRDVLGILRTVLFAPE
DLALVRGDPGERRRFLDELLTTRAPRYAGVRGDYERVLKQRGALLKSMRSARGADSGTLD
VWDGHLARHGAELLAARLDLVADVAPHVATAYAEVAPESRPARVAYRSSLGEAFPGTHDR
EVLEDALLAELHRVRSQEVERGVCLVGPHRDDLELHLGELPAKGYASHGESWSFALALRL
GGYELLRAEGAEPVLVLDDVFAELDRGRRRQLAKVAAAAEQVLITAAVAEDVPDELEGLR
FDVGHGEVRRV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgtccggcacctgcaggtcaccgacttcaggtcgtgggagcacgcggacctggcg
ttcgagccgggcgtgagcgtgctggtcgggcgcaacggccagggcaagacgaacctggtc
gaggcgctgggttacgtggccaccctgggctcgcaccgggtggccacggacgcgccgctg
gtccggcacggcgcgccccgcgcggtggtgcgcgccgcggtggtcaacgacgggcgcgag
ctgctggtcgagctggagatcacgccgggccgggcgaaccgggcgcgggtcaaccgcggc
ccggtgccgcggccgcgcgacgtgctgggcatcctgcgcacggtgctgttcgcgccggag
gacctggcgctggtgcgcggcgaccccggtgagcggcgcaggttcctcgacgagttgctc
accacccgggctcctcgttatgccggtgtgcgcggcgactacgaacgggtgctcaagcag
cggggcgcgctgctcaagagcatgcgctcggcgcgcggcgcggacagcgggaccctggac
gtgtgggacggccacctggcccggcacggcgcggagctgctggccgcgcggctggacctg
gtggccgacgtcgcgccgcacgtggcgaccgcgtacgccgaggtggcgccggagtcgcgg
cccgcgcgggtggcgtaccggtcgagcctgggcgaggcgttccccggcacgcacgaccgc
gaggtgctggaggacgccctgctggccgagctgcaccgggtgcggtcgcaggaggtggag
cggggcgtgtgcctggtcgggccgcaccgcgacgacctggagctgcacctgggcgagctg
cccgcgaagggctacgcgagccacggcgagtcgtggtcgttcgcgctggcgctgcggctg
ggcgggtacgagctgctgcgcgccgagggcgccgagccggtgctggtgctcgacgacgtg
ttcgccgagctcgaccgcggccgccggcggcagctcgcgaaggtggccgcggccgccgag
caggtgctgatcaccgcggcggtcgcggaggacgtgcccgacgagctggagggcctgcgg
ttcgacgtcggccacggggaggtgcgtcgtgtctga
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