Saccharothrix syringae: EKG83_00355
Help
Entry
EKG83_00355 CDS
T06258
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKG83_00355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyi03400
]
EKG83_00355
Enzymes [BR:
ssyi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EKG83_00355
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EKG83_00355
DNA repair and recombination proteins [BR:
ssyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EKG83_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
LPD14
Motif
Other DBs
NCBI-ProteinID:
QFZ16117
UniProt:
A0A5Q0GPV0
LinkDB
All DBs
Position
80928..81791
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALAHHLREHAVGRRVHRVDIASPQVLKTFTPPWTDLQGREVTGAGRFGKHLD
LDCDGLHLVVHLARAGWLRWSGTTAAAPPRPGRGPLALRVHLGPPGEGPGFDLTEAGTKK
GLAAWVVRDPAEVPGIARLGPDALSVTRARLEDLFAGRSERLKTALTDQALLAGIGNAYS
DEVMHVARLSPYATAGRLPAEALDRLHEAITTVLTDAVARSVGQSAATLKGEKRSGLRVH
GRTGLPCPVCGDAVREVSFADRAFQYCATCQTGGRPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaggtcgaagccctcgcccaccacctgcgcgagcacgccgtgggg
cggcgcgtgcaccgggtcgacatcgcctcgccccaggtgctcaagaccttcaccccgccg
tggaccgacctccagggccgcgaggtgaccggtgccggccggttcggcaagcacctggac
ctcgactgcgacggcctgcacctggtggtgcacctggcgcgcgccgggtggctgcgctgg
tcggggaccacggccgccgcaccgcccaggcccggccgggggccgctggcgctgcgcgtg
cacctcgggccgccgggggaggggcccggcttcgacctgaccgaggcgggcaccaagaag
ggcctggccgcctgggtggtgcgcgacccggcggaggtgccggggatcgcgcggctcggc
cccgacgcgctgtcggtgacccgggcgcggctggaggacctgttcgccggccggtccgag
cggctgaagaccgcgctgaccgaccaggccctgctcgcgggcatcggcaacgcctactcg
gacgaggtcatgcacgtggcccggctgtcgccgtacgcgaccgcgggcaggctgcccgcg
gaggcgctggaccggctgcacgaggcgatcaccaccgtgctgaccgacgcggtggcgcgg
tcggtggggcagtcggcggcgacgctgaagggcgagaagcggtcgggcctgcgggtgcac
gggcggaccgggctgccgtgcccggtgtgcggggacgcggtgcgcgaggtctccttcgcc
gaccgggccttccagtactgcgccacgtgccagaccgggggcaggccgctggccgaccgg
cgcctgtcccggctgctcaagtaa
DBGET
integrated database retrieval system
