Saccharothrix syringae: EKG83_04935
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Entry
EKG83_04935 CDS
T06258
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi03420
Nucleotide excision repair
ssyi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKG83_04935
03430 Mismatch repair
EKG83_04935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyi03400
]
EKG83_04935
Enzymes [BR:
ssyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKG83_04935
DNA repair and recombination proteins [BR:
ssyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKG83_04935
MMR (mismatch excision repair)
Other MMR factors
EKG83_04935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
HHH
zf-C2HC5
Motif
Other DBs
NCBI-ProteinID:
QFZ16901
UniProt:
A0A5Q0GSM6
LinkDB
All DBs
Position
1040551..1042623
Genome browser
AA seq
690 aa
AA seq
DB search
MHRMDRLLEGLDPEQRAAVEAPRGPVCVLAGAGTGKTRTITHRIAHLVQRGHVAAGQVLA
VTFTARAAGEMRTRLRALGVHGAQARTFHAASLRQLRYFWPRVVGGEPWQLIDRNKLRLV
AQAAHRVGLSTESDSLRDLAGEIEWAKASLVAPEDYPAAAGRTNRDTPAPAEQVVKVYRA
YEELKNKAQLLDFDDLLLHTAAALEEHGDVAEEFRDRYRCFVVDEYQDVTPLQQRVLDAW
LGQRDDLTVVGDANQTIYSFAGASPVPLLNFPRRFPHATVVRLERDYRSTPQVVALANQV
ISWARGRPAGSRLKLIGQRPDGPRPAFTEFDDESLEAGAVARRVKELLDDGVAASEIAVL
YRVNAQSELYEQALAEVGVPYQVRGGERFFQRAEVRQAMVALRAAAAHEPSGELPKVVRE
VLTGIGLTDEPPAGGAAREKWESLLALVELAEELVGQVEGADLPKFCAELDMRAEAQHPP
TVEGVTLASLHAAKGLEWDAVFLVGLVEGTLPIQHADGDDAAVEEERRLLYVGVTRAREH
LWLSWALARAAGGRRYRRRSRFLYGLIPEDHPASRTVAAKREPLQRRPKPQCRVCGSALV
DARSIKLSRCSSCPSDLDEELLTRLRAWRADRARELKVPAYVVFTDATLVAIAEQRPADV
ADLVSISGIGAAKLDRYGEDVLTLVRGSSG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcatggaccggctgctggagggactggacccggaacagcgcgccgccgtggaa
gcaccccgcggcccggtctgcgtcctggcgggcgcgggcaccggcaagacccgcaccatc
acccaccgcatcgcccacctggtccagcgcgggcacgtcgccgccggtcaggtcctcgcg
gtcacgttcaccgcgcgcgcggcgggcgagatgcgcacccggctgcgggcgctcggcgtg
cacggcgcgcaggcccgcacgttccatgccgcctccctgcgccagctccgctacttctgg
ccgcgcgtggtcggcggcgagccgtggcagctgatcgaccggaacaagctgcgcctggtc
gcccaggccgcccaccgggtgggcctgtccaccgagtccgactcgctgcgcgacctcgcc
ggtgagatcgagtgggccaaggcgtcgctggtcgcgcccgaggactacccggccgcggcc
ggccgcaccaaccgcgacaccccggcacccgccgagcaggtcgtgaaggtctaccgggcc
tacgaggagctgaagaacaaggcgcagctgctcgacttcgacgacctcctgctgcacacc
gccgcggcgctggaggagcacggcgacgtcgccgaggagttccgcgaccgctaccgctgc
ttcgtcgtcgacgagtaccaggacgtcacgccgctccagcagcgcgtgctcgacgcgtgg
ctggggcagcgcgacgacctgaccgtcgtcggcgacgccaaccagaccatctactccttc
gccggcgcctcgccggtgccgctgctgaacttcccgcgccgcttcccgcacgccaccgtg
gtgcggctggagcgcgactaccggtcgacgccgcaggtcgtcgccctggccaaccaggtc
atcagctgggcgcgcggccgccccgccggctcccggctcaagctgatcggccagcgcccg
gacggcccgcggccggcgttcaccgagttcgacgacgagtcgctggaggcgggcgccgtc
gcgcggcgggtgaaggagctgctggacgacggcgtggcggccagcgagatcgccgtcctg
taccgggtcaacgcccagtcggagctctacgagcaggcgctggccgaggtcggcgtgccc
taccaggtgcgcgggggcgagcggttcttccagcgcgccgaggtgcggcaggcgatggtc
gccctgcgcgccgcggccgcgcacgagccgtccggggagctgccgaaggtcgtccgcgag
gtgctgaccggcatcggcctcaccgacgaaccccccgccggcggcgcggccagggagaag
tgggagtcgctgctcgcgctggtcgagctggccgaggagctggtcggccaggtcgagggc
gcggacctgcccaagttctgcgccgagctggacatgcgcgccgaggcccagcacccgccg
accgtggagggcgtgacgctcgcgtccctgcacgcggcgaagggcctggagtgggacgcg
gtgttcctggtcgggctggtcgagggcaccctgccgatccagcacgcggacggcgacgac
gcggcggtcgaggaggagcgccggctgctgtacgtgggggtgacccgggcccgcgagcac
ctgtggctgtcgtgggcgctggcgcgcgccgcgggcggtcggcgctaccggcgccggagc
cggttcctctacgggctgatcccggaggaccaccccgcctcgcgcacggtcgccgccaag
cgcgagccgctgcagcgcaggcccaagccgcagtgccgcgtgtgcgggtcggcgctggtc
gacgcgcggtcgatcaagctgagccggtgctcctcgtgcccgtcggacctcgacgaggag
ctgctgacccggctgcgcgcgtggcgggcggaccgggcgcgcgagctgaaggtgcccgcg
tacgtcgtcttcaccgacgcgacgctcgtggcgatcgccgagcagcgcccggcggacgtc
gccgacctggtctccatctccggcatcggcgccgccaagctcgaccgctacggggaggac
gtcctcaccctcgtgcgcggcagctccggttga
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