Saccharothrix syringae: EKG83_06240
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Entry
EKG83_06240 CDS
T06258
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EKG83_06240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyi03019
]
EKG83_06240
03009 Ribosome biogenesis [BR:
ssyi03009
]
EKG83_06240
Messenger RNA biogenesis [BR:
ssyi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EKG83_06240
Ribosome biogenesis [BR:
ssyi03009
]
Eukaryotic type
Pre-60S particles
RNases
EKG83_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QFZ17116
UniProt:
A0A5Q0GSP8
LinkDB
All DBs
Position
complement(1332006..1332617)
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AA seq
203 aa
AA seq
DB search
MMDRLVWIDCEMTGLDLGKDALIEIAALVTDAELNVLGEGVDVVIHADDTVLDSMPDVVM
QMHAKSGLTEEVRRSAVTLADAEALVLDYVKQWVPDPRTAPLAGNSIATDRGFIARDMPV
LDAHLHYRMVDVSSIKELCRRWYPRIYYAQPGKGLAHRALADIRESIRELAYYRRTAFVP
QPGPTSEQAQAVASELLAADRVE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgatggatcgcctggtgtggatcgactgcgagatgaccggactcgacctcggcaaggac
gccctgatcgagatcgcggcactggtgaccgacgcggagctgaacgtgctcggcgagggg
gtcgacgtggtgatccacgccgacgacaccgtgctcgactcgatgccggacgtcgtgatg
cagatgcacgccaagtcggggctcaccgaggaggtgcggcggtcggcggtgacgctggcc
gacgccgaggccctggtgctcgactacgtcaagcagtgggtgccggacccgcgcaccgcg
ccgctggcgggcaactccatcgccaccgaccgcgggttcatcgcccgcgacatgcccgtg
ctcgacgcgcacctgcactaccggatggtcgacgtgtcgtcgatcaaggagctgtgccgg
cgctggtacccgcgcatctactacgcgcagccgggcaagggcctggcgcaccgcgcgctc
gccgacatccgcgagtccatccgggagctcgcgtactaccggcgcaccgcgttcgtgccg
cagccggggcccacctcggagcaggcgcaggccgtggccagcgaactcctggccgccgac
cgcgtggaatag
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