Saccharothrix syringae: EKG83_06305
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Entry
EKG83_06305 CDS
T06258
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi02024
Quorum sensing
ssyi03060
Protein export
ssyi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
EKG83_06305 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EKG83_06305 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKG83_06305 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ssyi02044
]
EKG83_06305 (secD)
Secretion system [BR:
ssyi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
EKG83_06305 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
QFZ17128
UniProt:
A0A5Q0GT10
LinkDB
All DBs
Position
1344010..1346160
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AA seq
716 aa
AA seq
DB search
MSRPDARRALVVRGLLSLGVLVASAFAVLTVPPRLGLDLRGGTQIVLETPSDATADATDR
AMEVLRRRVDGLGVAEPVLARSGDHRIVVELPGLQDPAEAVEVLGRTAQLAVRPVTGPGS
SPTPDGDSVGLGDVVLTGEGIEDARATPDQRGAGHVVGVDFRGDAPATWQRVTAEAACAP
PGDPRRRVAFVLDGEVVSAPQVDPSVVCGTGMIGDGTRITGRFTRAEAEELALVIRSGAL
PVPVEVVEQRTVGPTLGAEAIDASARAAVLGVALTGLFLVFAYRLAGLVAVLALVGYAGV
AYAALLAVGATLTLPGLAGFVLAIGMAVDANVLVFERSREEYARRKRLPRSVDQGFRGAV
GAVADSNITTLLAAGLLFWLATGPVKGFGVTLVIGVLASLFSALVLTRVLLRLVMPLLEK
RPRWSGLHSLGRVRPWLTARGIKLYRNPRRPLLVAGLVLLVAVAGLLVRGLELGVEFTGG
RVLEFTATSADVGRVRAELASAGFADAVVVNAGDGLSVRTGPVDPAAATRIGEAVDRATG
GAEKVGDELIGPSLGAELRRDALIALAVAVAAQLAYLAVRFDWRLGLATVVALVADVVVL
VGAFAWLGKTADAVFLAAVLTVIGYSVNDSVVVFDRVRELRRTRAPFPDVVSDAVLQTLP
RTVNTGIGVLFVLAALLLFGDGSLADFAAALLIGLVAGTVSTVLTAAPVAIALEER
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccccgatgcgcgacgggctctcgtcgtccgcgggctgttgtccctcggcgtg
ctcgtcgcgtccgccttcgccgtgctcaccgtcccaccgcgcctcggcctcgacctgcgc
ggtggtacccagatcgtgttggaaacaccgtccgacgccaccgccgacgccaccgaccgg
gcgatggaggtgctgcgccgccgcgtcgacgggctcggcgtcgccgaacccgtcctggcc
cgctccggagatcaccggatcgtggtcgaactacccggcctccaggacccggcggaggcc
gtcgaggtgctcggccgcaccgcgcaactggcggtgcggcccgtgaccggacccgggtcg
tccccgacccccgacggcgactcggtcggcctcggcgacgtcgtgctcaccggcgagggc
atcgaggacgcccgcgccacgcccgaccagcggggcgccggccacgtggtcggcgtcgac
ttccgcggcgacgcgccggccacctggcagcgggtgacggccgaggccgcgtgcgccccg
ccgggcgacccgcggcggcgggtggcgttcgtgctggacggcgaggtggtgtccgcgccg
caggtcgacccctcggtggtgtgcggcaccggcatgatcggcgacggcacccggatcacc
ggccggttcacccgggccgaggccgaggagctggcgctggtgatccggtccggcgcgctg
ccggtgccggtggaggtggtggagcagcggaccgtcggcccgacgctgggcgccgaggcg
atcgacgccagtgcccgggccgcggtgctgggcgtcgcgctgaccgggttgttcctggtg
ttcgcctaccggttggccgggctggtggccgtgctcgcgctggtcggctacgcgggcgtg
gcctacgcggcgctgctggcggtcggcgcgacgctgacgctgcccggcctggccgggttc
gtgctggcgatcggcatggcggtggacgccaacgtgctggtgttcgagcgctcgcgcgag
gagtacgcgcggcgcaagcgcttgccacgatcggtggaccaggggttccggggcgcggtg
ggcgcggtggcggactcgaacatcaccacgctgctggccgccggcctgctgttctggctg
gccaccgggcccgtgaaggggttcggcgtcaccctggtgatcggcgtgctggcctcgctg
ttcagcgccctggtgctgacccgggtgctgttgcggttggtgatgccactgctggagaag
cgtccacgctggagtggtctgcactcactcggtcgggtgcgcccatggctgaccgcgcgc
ggcatcaagctgtaccggaacccccgccgcccgctcctggtggccggcctcgtgctgttg
gtcgcggtggccggcctgctggtgcgcggcctggaactgggcgtcgagttcaccggggga
cgggtcctggagttcaccgccaccagcgccgacgtaggccgggtacgcgccgagctggcc
tcagccggcttcgccgacgcggtcgtggtcaacgcgggcgacggcctgtcggtgcggacc
ggcccggtcgacccggccgccgcgacgcggatcggggaggcggtcgaccgcgcgaccggc
ggcgccgagaaggtcggtgacgagctgatcggccccagcctgggcgccgagctgcggcgc
gacgccctgatcgcgctggcggtggcggtggccgcgcagctggcctacctggccgtccgg
ttcgactggcggctgggcctggccacggtggtcgcgctggtcgccgacgtggtggtgctg
gtgggcgcgttcgcgtggttgggcaagaccgcggacgcggtgttcctggccgcggtgctg
accgtcatcggctactcggtcaacgactcggtggtggtgttcgaccgggtgcgcgagctg
cggcgcacccgcgccccgttccccgacgtggtgagcgacgccgtgctgcaaaccctgccc
aggacggtgaacaccggcatcggcgtgctgttcgtgctggccgcgctgctgctcttcggc
gacggctcgctggccgacttcgccgccgcgctgctgatcggcctggtggccggcaccgtg
tcgacggtgctgaccgcggcacccgtggcgatcgcgctggaggagcggtga
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