Saccharothrix syringae: EKG83_06620
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Entry
EKG83_06620 CDS
T06258
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssyi02000
]
EKG83_06620
Transporters [BR:
ssyi02000
]
Other transporters
Pores ion channels [TC:
1
]
EKG83_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
QFZ24074
UniProt:
A0A5Q0HDN1
LinkDB
All DBs
Position
complement(1418875..1419759)
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AA seq
294 aa
AA seq
DB search
MDVERTLAVEWWVENGPRIAGGALRIVLIVVVAVIIRAVLRRLIDGMTRGNGGRKPKLLK
PLRERAPQALGAFASERREQRAKTIGSVLKSFVTIIVFGVAFIQVLTELGMNVAPILTSA
GILGVAIGFGAQNLVKDFLAGMFMMLEDQYGVGDVVDLGPATGTVESVALRITTIRDTNG
TVWYVRNGEIMRVGNSSQGFAVAVVDLPLAYGANLASATEVLTVAAEEATAEELLAKDVT
DKPQVLGVEKVTPEGITMRVTVKVRPGRQWAVQRALRAKLMPALEDAGISLKAS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtggagcggacgctcgcagtcgagtggtgggtcgagaacggccccaggatcgcg
ggcggcgcgctgcggatcgtgttgatcgtggtggtcgcggtgatcatccgagcggtcctg
cggcggctcatcgacggcatgacccgcggcaacggcggtcgcaagcccaagctgctcaag
ccgctgcgcgagcgggcgccgcaggcgctgggcgcgttcgcctccgagcggcgggagcag
cgggccaagaccatcggctcggtgctgaagtcgttcgtcacgatcatcgtcttcggcgtc
gcgttcatccaggtgctgaccgagctgggcatgaacgtcgcacccatcctgacctcggcg
ggcatcctcggcgtcgcgatcggcttcggcgcgcagaacctggtcaaggacttcctggcc
ggcatgttcatgatgctggaggaccagtacggcgtgggcgacgtggtcgacctcgggccc
gcgacgggcacggtcgagtcggtggccctgcgcatcaccacgatccgcgacaccaacggc
acggtctggtacgtccgcaacggcgagatcatgcgggtcggcaactcgtcgcagggcttc
gcggtggccgtggtcgacctgccgctggcctacggcgcgaacctcgcctcggccacggag
gtgctgaccgtggcggccgaggaggccacggcggaggagctgctggccaaggacgtgacg
gacaagccgcaggtcctgggtgtggagaaggtgacgccggagggcatcaccatgcgcgtg
acggtcaaggtgcggccggggcggcagtgggccgtgcagcgcgcgctgcgggccaagctc
atgccggcgctggaggacgcggggatctcgctcaaggcatcgtga
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