Saccharothrix syringae: EKG83_07995
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Entry
EKG83_07995 CDS
T06258
Name
(GenBank) DEDD exnuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi03030
DNA replication
ssyi03430
Mismatch repair
ssyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKG83_07995
03430 Mismatch repair
EKG83_07995
03440 Homologous recombination
EKG83_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyi03032
]
EKG83_07995
03400 DNA repair and recombination proteins [BR:
ssyi03400
]
EKG83_07995
Enzymes [BR:
ssyi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKG83_07995
DNA replication proteins [BR:
ssyi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKG83_07995
DNA repair and recombination proteins [BR:
ssyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKG83_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
UVR
Motif
Other DBs
NCBI-ProteinID:
QFZ17426
UniProt:
A0A5Q0GTL0
LinkDB
All DBs
Position
complement(1686331..1688034)
Genome browser
AA seq
567 aa
AA seq
DB search
MTEQLTFDELGTPLRETTFVVFDLETTGGRAGEDAITEIGAVKVRGGRVLGEFATLVDPE
RGIPPQVTALTGITQVMVTGAPRLATVLPAFLEFAAGAVLVAHNSGFDVGFIKAACERLG
YPWRRPTVVCTVRLARRVLTRDEAPSCRLSALAALFGVAEQPNHRALTDARATVEVLHHL
LERVGSVGVHSLEELVAYLPEVTAEQRRKRSLAAHLPSVPGVYLFRGPSEEVLYVGTASD
LRRRVRQYFTASEGRKRLREMVALAVRVDAVECAHPLEAEVRELRLISAHRPAYNRRSKN
PGGAWWLVLTDEAFPRLSVVRAPRAGALGPFRSRRLAEAAAETLQDAVPLRACAQRIPAR
KPSGTPCALYELGRCKAPCAGLQSAADYAPAADAFRRLVAGVDTAPLDALAAQLDALAQA
HRFEDAAARRDRVSALVRALDRAQRLAALAALPELVAARPDGSGGWEFAVVRHGRLASAG
VARRGVPPMPVVESLVAGAETVVPGEGPLLGAPAEEVGVVLRWLERPGTRLVRCDTPWAS
PAGGAGSWRGWVARADAGRDQYRDAGH
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacagctcacgttcgacgaactgggcaccccgctgcgcgagaccacgttcgtc
gtgttcgacctggagaccacgggtggccgggcgggcgaggacgcgatcaccgagatcggc
gcggtcaaggtgcgcggcgggcgggtgctcggcgagttcgccaccctggtggacccggag
cggggcatcccgccgcaggtcacggccctgaccgggatcacccaggtgatggtgaccggt
gcgccgcggctggccaccgtgctgcccgcgttcctggagttcgcggccggcgccgtgctc
gtggcgcacaactcgggcttcgacgtgggcttcatcaaggccgcctgcgagcgcctgggc
tacccctggcgcaggccgaccgtggtgtgcacggtgcgcctggcccggcgggtgctgacc
cgcgacgaggcgcccagctgccggctgtccgcgctggccgcgctgttcggcgtggccgag
cagcccaaccaccgggcgctgaccgacgcccgcgccaccgtggaggtgctgcaccacctg
ctggaacgggtcggctcggtgggcgtgcactcgctggaggagctggtcgcctacctgccg
gaggtgaccgccgagcagcgccgcaagcgctcgctggccgcgcacctgccctcggtgccc
ggcgtgtacctgttccgcggcccgtcggaggaggtcctgtacgtcggcacggcctccgac
ctgcgcaggcgggtgcggcagtacttcaccgcgagcgagggccgcaagcggttgcgggag
atggtggcgctggccgtgcgggtggacgcggtcgagtgcgcccacccgctggaggccgag
gtgcgggagctgcggctgatcagcgcgcacaggcccgcctacaaccggcgctccaagaac
ccgggcggcgcgtggtggctggtgctgaccgacgaggcgttcccgcggctgtcggtggtc
cgggcgccgcgcgcgggtgcgctggggccgttccggtcgcggcgcctggccgaggccgcc
gcggagacgctccaggacgccgtgccgctgcgggcgtgcgcccagcgcatcccggcgcgc
aagccctcgggcacgccgtgcgccctctacgagctgggacggtgcaaggcgccgtgcgcg
gggctgcagtcggcggccgactacgcgcccgccgccgacgcgttccggcggctcgtcgcg
ggcgtcgacacggcaccgctggacgccctggcggcccagttggacgccctggcgcaggcg
caccggttcgaggacgccgccgcccgccgggaccgggtgtcggccctggtgcgggcgctg
gaccgggcgcagcggctggccgcgctcgccgccctgccggagctggtggccgcccggccc
gacggctcgggcgggtgggagttcgcggtggtccggcacgggcggctggcctcggcgggg
gtggcgcggcggggcgtgccgccgatgcccgtggtggagtcgctggtggccggggcggag
accgtcgtgccgggcgaggggccgctgctcggcgcacccgccgaggaggtgggcgtggtg
ctgcgctggctggagcggcccggcacccgcctggtgcgctgcgacaccccgtgggcctcg
ccggcgggcggcgccgggtcgtggcgcgggtgggtggcgcgcgccgacgccggtcgcgac
cagtaccgggacgccggccactag
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