Saccharothrix syringae: EKG83_13635
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Entry
EKG83_13635 CDS
T06258
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00040
Pentose and glucuronate interconversions
ssyi01100
Metabolic pathways
ssyi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKG83_13635
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKG83_13635
Enzymes [BR:
ssyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EKG83_13635
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QFZ24219
UniProt:
A0A5Q0HDP0
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Position
complement(2957968..2959080)
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AA seq
370 aa
AA seq
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MACTGQPTSTSTSTSTTTTTTTTTTTTTSTTTTTNPPAGVATGYASQNGGTTGGQGGATV
RATTGTQIHQALCSRAASSTPITIQVEGTINHGNTAKVSGDSCETAAGVIELKRISNVTI
IGVGSGAVFDQLGIHIRESRNIIIRNVTIRNVKKSGSPTSNGGDAIGMESNVRNVWVDHV
NLLASGGESEGYDGLFDMKDDTQYVTLSYSTLRNSGRGGLIGSSESDRSNGFVTFHHNLY
ENIDSRTPLLRGGIAHIYNNHYVSLNESGINSRAGAKAKVDNNYFKNSKDVLGTFYTSEA
GYWQVGGNIFDNVTWSSPGSDTNPAGPDVKSTTTVGIPYGYTLDRAECVPNIVSRTAGAN
TGLQESNGTC
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtggcctgcaccggacagcccaccagcacctccacgtcgacttcgaccaccaccaccacc
acgacgacgacaacgacgacgacctccaccaccacgacgacgaacccgcccgcgggcgtc
gcgaccggctacgcgtcccagaacggcgggaccaccggcggccagggcggtgcgacggtc
cgggccaccaccggcacccagatccaccaggccctgtgcagccgggccgccagctccacc
ccgatcaccatccaggtcgagggcaccatcaaccacggcaacaccgccaaggtctcgggc
gacagctgcgagacggccgcgggggtcatcgaactcaagcggatcagcaacgtcaccatc
atcggcgtcggcagcggggccgtgttcgaccagctcggcatccacatccgcgagtcccgc
aacatcatcatccgcaacgtcacgatccggaacgtcaagaagtccggctcccccacgtcc
aacggcggcgacgccatcggcatggagagcaacgtccgcaacgtctgggtcgaccacgtc
aacctgctcgcctcgggcggcgagtcggagggctacgacggcctgttcgacatgaaggac
gacacccagtacgtgaccctgtcctacagcaccctgcgcaactccggccgcggcgggctg
atcgggtccagcgagagcgaccgctccaacgggttcgtcaccttccaccacaacctgtac
gagaacatcgactcgcgcaccccgctgctgcgcggcggcatcgcccacatctacaacaac
cactacgtgagcctcaacgagtcgggcatcaactcccgcgccggcgccaaggccaaggtg
gacaacaactacttcaagaactccaaggacgtcctcggcaccttctacaccagcgaggcc
gggtactggcaggtcggcggcaacatcttcgacaacgtgacctggtcgtcccccggcagc
gacaccaaccccgccgggcccgacgtcaagtccaccaccacggtcggcatcccctacggc
tacaccctcgaccgcgccgagtgcgtgccgaacatcgtgagccggacggcgggcgccaac
accggcctgcaggagtcgaacggcacctgttag
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