Saccharothrix syringae: EKG83_16125
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Entry
EKG83_16125 CDS
T06258
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00300
Lysine biosynthesis
ssyi00470
D-Amino acid metabolism
ssyi01100
Metabolic pathways
ssyi01110
Biosynthesis of secondary metabolites
ssyi01120
Microbial metabolism in diverse environments
ssyi01230
Biosynthesis of amino acids
Module
ssyi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EKG83_16125
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EKG83_16125
Enzymes [BR:
ssyi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EKG83_16125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
QFZ18776
UniProt:
A0A5Q0GXH2
LinkDB
All DBs
Position
complement(3639495..3640781)
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AA seq
428 aa
AA seq
DB search
MTTPMADMQGNAISALADEFGTPLFVYDADVLEDTYRELRDALPAGVDIFYSLKANPNVS
VCALLNRLGTGAEVSSSAELATALRAGVAPRDVIFLGPGKDERELAACVEAGIRAVVCES
LDELDLLDSLLAAAGRDGFPVLLRVNPAFGSKGSGLAMGGKPRQFGIDEARLRESGHRLA
ALRNIRLTGVHAYMGTRFLDHEDVVHNTRRILATAEDLAGHLGFPLETVDFGGGLGVAYF
DNEEDPDLAALGTGLAEVLSSFSARHPHCRMIMELGRFLTAAAGTYVVRARYVKESMGES
FVVADGGTNHHMAAVGIGSFVKRNFPIRHLGGRTGGALRPYTVTGPLCTPNDVVARKVRL
PEVRPGDLLAVGRSGAYGPTASPGLFLSHGFPAEVMVHRGRAHLVRERDSTEDLLAKQRL
VDFRAVSG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccgatggcggacatgcagggcaatgcgatctcggcgctcgccgacgaattc
ggcacccccttgttcgtctacgacgcggacgtcctggaagacacgtaccgcgagctgcgc
gacgcgctccccgccggggtcgacatcttctactcgctcaaggccaacccgaacgtgagc
gtctgcgcgctgctgaaccggttgggcaccggcgccgaggtctcctcctccgccgaactg
gccaccgccctgcgagccggggtcgcgccgcgcgacgtcatcttcctcggccccggcaag
gacgagcgggagctcgccgcgtgcgtcgaagccggcatccgcgcggtcgtctgcgaatcg
ctggacgaactcgacctgctcgactcgctgctggctgcggccggtcgcgacgggttcccg
gtgctcctgcgggtgaaccccgccttcggcagcaaggggtccgggctggccatggggggc
aagccccggcagttcggcatcgacgaagcccggctgcgcgagtccgggcaccggctcgcg
gccctgcgcaacatccggttgaccggggtgcacgcctacatggggacgcggttcctcgac
cacgaggacgtcgtccacaacacccggcgcatcctcgcgaccgcggaggacctggccggg
cacctcggcttccccctggaaacggtggacttcggcggcgggctcggcgtcgcctacttc
gacaacgaggaggacccggacctcgccgcgctggggaccgggctggcggaagtcctctcc
tccttctccgcgcgccacccgcactgccggatgatcatggagctgggccggttcctgacg
gccgcggccggcacgtacgtcgtccgggcccgctacgtgaaggagtccatgggcgagagc
ttcgtggtcgccgacggcggcaccaaccaccacatggccgccgtcggcatcgggagcttc
gtcaagcgcaacttcccgatccgccacctcgggggtcggaccggtggggcgctgcggccc
tacaccgtcaccgggccgctgtgcacgcccaacgacgtggtcgccaggaaggtccggctg
ccggaggtgcggccgggtgacctgctggcggtggggcggtccggcgcctacgggcccacc
gcctcaccggggctcttcctcagccacggcttcccggccgaggtgatggtgcaccgcggg
cgggcccacctggtccgggagcgcgacagcacggaggacctgctggccaagcagcgcctc
gtcgacttccgcgcggtgtccggatga
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