Saccharothrix syringae: EKG83_18340
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Entry
EKG83_18340 CDS
T06258
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKG83_18340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssyi02000
]
EKG83_18340
Transporters [BR:
ssyi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
EKG83_18340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
TOBE_3
AAA
Rad17
AAA_22
AAA_25
CysA_C_terminal
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QFZ19141
UniProt:
A0A5Q0GYQ4
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Position
4182164..4183240
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AA seq
358 aa
AA seq
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MTHQQPPEPGSRPSGLQLSGVRKSFGGHVALAGLDLDLAPGELVSLLGPSGCGKTTALRV
VAGFETADAGSVRVDGRDLTGVPANKRDMGMVFQSYSLFPNLTAAQNVAFGLRLRKAPDR
AGRVAELLELVGLAHLGGRYPHQLSGGQQQRVALARALAIRPRVLLLDEPLSALDAKVRV
NLRDEIRRIQTELGTTTLFVTHDQEEALAVSDRVGVMSQGRLEQLGTPAEVYREPATAFV
ARFVGVSNAVRATAGPDGVRVGAHRLPTAAAGELTGDVEVIVRPEDIGISPRGGRDDGAL
VGSVVTQSFLGPVTRLSVRLDDGQVLRVDQPSGRAAEFPPGAAVALDLAAARLMVVKA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccagcaaccgcccgagcccggttcgcggccgtccggtctgcagctgtccggg
gtgcgcaagtcgttcggcgggcacgtggcgctcgccgggctcgacctcgacctggcaccg
ggtgagctggtcagcctgctgggccccagcggctgcggcaagaccacggcgctgcgcgtg
gtcgccgggttcgagaccgccgacgcgggctcggtgcgggtcgacggccgggacctgacc
ggcgtgcccgccaacaagcgcgacatgggcatggtgttccagtcctacagcctgttcccc
aacctgaccgcggcgcagaacgtcgcgttcggcctgcggctgcgcaaggcgcccgaccgg
gccgggcgggtcgccgagctgctggagctggtcgggctcgcgcacctgggcgggcgctac
ccgcaccagctctccggcggccagcagcagcgcgtggcgctggcccgggcgctggccatc
cggccgcgcgtgctgctgctggacgagccgctgtccgcgctggacgcgaaggtgcgggtg
aacctgcgcgacgagatccggcgcatccagaccgagctgggcaccaccaccctgttcgtc
acgcacgaccaggaggaggcgctggccgtgtccgaccgggtgggcgtgatgtcgcagggc
aggctggagcagctgggcacgcccgccgaggtctaccgggagccggccaccgcgttcgtc
gcccgcttcgtcggcgtcagcaacgcggtgcgcgccaccgccgggcccgacggcgtgcgg
gtgggcgcccaccggctgcccaccgcggcggccggggagctgaccggcgacgtcgaggtg
atcgtgcggccggaggacatcggcatctcgccgcgcggcggccgggacgacggcgcgctg
gtgggcagcgtggtcacgcagagcttcctcgggccggtgaccaggctgtcggtgcggctc
gacgacgggcaggtcctgcgggtggaccagccgtccgggcgggcggcggagttcccgccg
ggtgccgcggtcgcgctggacctcgccgccgcccggctgatggtcgtgaaagcgtga
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