Saccharothrix syringae: EKG83_18430
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Entry
EKG83_18430 CDS
T06258
Name
(GenBank) HAMP domain-containing protein
Organism
ssyi
Saccharothrix syringae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
ATG17_like
GAF_3
Laminin_II
Baculo_PEP_C
OmpH
Crescentin
ATG14
RNase_Y_N
Fez1
FBF1
Motif
Other DBs
NCBI-ProteinID:
QFZ19157
UniProt:
A0A5Q0GYN1
LinkDB
All DBs
Position
4198429..4203006
Genome browser
AA seq
1525 aa
AA seq
DB search
MAETTAKGTAVARRGAGKTAPVDQPELRQLLAGLTAVRDGDFGTRLPDDADGLLGEIATV
FNGMVDQLSLFTSEVTRVAREVGTDGRLGGQAEVPGVSGTWKDLTESVNAMAGNLTSQVR
DIAQVATAVARGDLSQKIDVDARGEILELKETVNTMVDQLSAFADEVTRVAREVGSEGRL
GGQAQVPGVAGTWRDLTDSVNFMAGNLTDQVRNIAQVTTAVARGDLSQKITVTARGEILE
LKNTINTMVDQLSSFADEVTRMAREVGTEGILGGQADVKGVSGTWRDLTDSVNFMAGNLT
SQVRSIAQVATAVARGDLSQKITVTARGEILELKNTINTMVDQLSSFAAEVTRVAREVGT
EGRLGGQADVKGVSGTWKDLTESVNVMGDNLTAQVRSIAQVTTAVARGDLSQKIRVDARG
EILELKDTINTMVDQLSAFADEVTRVAREVGTEGNLGGQATVRGVSGTWKDLTDNVNVMA
SNLTSQVRSIAQVATAVARGDLSQKITVEAKGEVAALAGVINTMVDTLSAFADEVTRVAR
EVGTEGILGGQARVPNVAGTWKDLTDNVNSMANNLTNQVRNIAQVTTAVAKGDLTRKIDV
DARGEILELKTTINTMVDQLSAFAQEVTRVAREVGTEGKLGGQAEVEGVSGTWKRLTENV
NELAGNLTRQVRAIAEVTSAVAAGDLTRQITVDASGEVSELKDNINSMVESLRVSTRANQ
DQDWLKTNLAGISSLMQGRRDLAVVAELIMDELAPLVSAQYGAFYLADDTAEEPELRLIA
SYGRPDAEDDVHARPSSFRIGQSLVGQAARSRRTIAVDDVPPGYVTVSSGLGQTAPINLV
VLPIVVEEQVLGVIELASVHRFTPIHRDFLEQLMETVGVNVNTIVANARTDELLAESQRL
AGELQARSGELQKRQEQLQESNAELEEKAALLAQQNRDIETKNLEIEQARQELETRAKQL
ALASKYKSEFLANMSHELRTPLNSLLILAQLLAQNPTRNLTPKQVEYAGIIHSAGSDLLQ
LINDILDLSKVEAGKMDVTPERVPLRRLLDYVEATFRPMTTQKSLGFRITTAAGVPAELL
TDDSRLRQVLRNLLSNAVKFTETGSVELRIEPADPAELPAPVRRHGQAIAFRVVDTGIGI
AEQQLESIFGAFQQADGTTSRKYGGTGLGLSISREIAYLLGGVVTAESTLGRGSTFTLYM
PVARPEFQELPVDDGTEVPAALPPAEQPTPADNGGAGAPAHQRRLLVIEERPQGLLSLVA
QSAVTDLADSNDPRGPVEVITVAGAQEAAAVLAAEACHCVVLELDMPDGAALEFLDAMDG
DAGLGNVPVLAHNNRRLAPDQEQRVQARAGTRPLELLSSLDELRERIALHLTAEVPGAVL
PLVRHEEPVHHAEPRPVNGRLSGRTVLIADDDARNLFALSSILELHGVSVLHAENGREAI
DVLGANPEVDLVLMDVMMPEMDGYAATTAIRAMPEHADLPIIAVTAKAMPGDREKSIDSG
ANDYVTKPVDSDDLVNCVQRWLLDR
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacgacggccaaggggaccgcggtcgccagacggggcgccggcaagaccgca
ccggtggaccagcccgagctgcgccagttgctggccgggttgaccgcggtccgcgacggc
gacttcggcacccgcctgcccgacgacgccgacggcctgctcggtgagatcgccaccgtc
ttcaacggcatggtggaccagctctccctgttcacctccgaggtcacccgggtggcccgc
gaggtcggcaccgacggccggctgggcggccaggccgaggtgcccggcgtgtccggcacc
tggaaggacctgaccgagtcggtcaacgccatggcgggcaacctgaccagccaggtccgc
gacatcgcgcaggtggccaccgcggtggcgcggggcgacctgtcgcagaagatcgacgtc
gacgcgcgcggcgagatcctggagctgaaggaaaccgtcaacacgatggtggaccagctc
tcggcgttcgccgacgaggtcacccgggtggcgcgcgaggtcggcagcgagggcaggctg
ggcggtcaggcccaggtgcccggcgtcgccggcacctggcgcgacctgaccgactcggtg
aacttcatggccggcaacctcaccgaccaggtgcgcaacatcgcgcaggtgaccaccgcc
gtggcgcggggcgacctgtcgcagaagatcacggtgaccgcgcgcggcgagatcctggag
ctgaagaacaccatcaacacgatggtcgaccagctctcctcgttcgccgacgaggtcacc
cgaatggcccgcgaggtgggcaccgagggcatcctgggcggtcaggccgacgtgaagggc
gtctccggcacgtggcgcgacctgaccgactcggtgaacttcatggcgggcaacctgacc
tcgcaggtgcggtcgatcgcccaggtggcgacggcggtggcgcggggcgacctgtcgcag
aagatcacggtcacggcccgcggcgagatcctggagctgaagaacaccatcaacacgatg
gtggaccagctctcctcgttcgcggccgaggtgacgcgcgtggcgcgcgaggtgggcacc
gagggccggctgggcggccaggccgacgtcaagggcgtgtcgggcacctggaaggacctc
accgagtcggtgaacgtcatgggcgacaacctgaccgcgcaggtgcggtcgatcgcccag
gtgaccaccgcggtggcccgcggcgacctgtcccagaagatccgcgtggacgcgcgcggc
gagatcctggagctcaaggacaccatcaacacgatggtcgaccagctctccgcgttcgcc
gacgaggtgacccgcgtggcgcgcgaggtcggcaccgagggcaacctcggcggccaggcc
accgtgcgcggcgtgtcgggcacctggaaggacctgaccgacaacgtcaacgtgatggcc
tcgaacctgaccagccaggtgcggtccatcgcgcaggtggccaccgcggtggcccgcggc
gacctgtcccagaagatcaccgtcgaggccaagggcgaggtcgcggccctggccggggtg
atcaacacgatggtcgacacgctgtccgcgttcgccgacgaggtgacccgcgtggcgcgc
gaggtgggcaccgagggcatcctgggcggtcaggcgcgggtgcccaacgtggcgggcacg
tggaaggacctgaccgacaacgtcaactcgatggcgaacaacctgaccaaccaggtccgc
aacatcgcccaggtcaccaccgcggtcgccaagggcgacctgacccgcaagatcgacgtc
gacgcgcgcggcgagatcctggagctcaagaccaccatcaacaccatggtcgaccagctc
tcggccttcgcccaggaggtcacccgggtcgcccgggaggtgggcaccgagggcaagctg
ggcggccaggccgaggtcgagggcgtctcgggcacctggaagcggctgaccgagaacgtc
aacgagctggccggcaacctcacccgccaggtgcgcgccatcgccgaggtcaccagcgcc
gtcgccgcgggcgacctgacccgccagatcaccgtggacgcctccggcgaggtctccgag
ctgaaggacaacatcaactcgatggtggagtccctgcgggtgtccaccagggccaaccag
gaccaggactggctcaagaccaacctggccggcatctccagcctcatgcagggccggcgc
gacctggccgtcgtggccgagctgatcatggacgagctggcgccgctggtctccgcccag
tacggcgcgttctacctggccgacgacaccgccgaggagccggagctgcgcctgatcgcc
tcctacggcaggcccgacgccgaggacgacgtccacgcccggccctccagcttccggatc
ggccagtccctggtcggccaggccgcgcgcagccgccgcaccatcgccgtggacgacgtg
ccgcccggctacgtcacggtgtcctccgggctggggcagaccgcgccgatcaacctcgtg
gtgctgcccatcgtggtggaggagcaggtgctcggcgtcatcgagctggcctcggtgcac
cggttcaccccgatccaccgcgacttcctcgaacagctgatggagaccgtcggcgtcaac
gtcaacaccatcgtcgccaacgcccgcaccgacgagctgctggcggagtcccagcgcctg
gccggcgagctgcaggcccgctccggcgagctgcagaagcggcaggagcagctgcaggag
tccaacgcggagctggaggagaaggccgcgctgctcgcccagcagaaccgcgacatcgag
accaagaacctggagatcgagcaggccaggcaggagctggagacgcgcgccaagcagctc
gcgctggcgtcgaagtacaagtcggagttcctggccaacatgagccacgagctgcgcacc
ccgctcaacagcctgctcatcctggcccagctgctggcgcagaacccgacccgcaacctg
acccccaagcaggtcgagtacgcgggcatcatccactcggcgggctcggacctgctccag
ctgatcaacgacatcctcgacctgtccaaggtcgaggcgggcaagatggacgtcacgccc
gagcgcgtcccgctgcggcggctgctggactacgtcgaggccaccttccggccgatgacc
acgcagaagagcctgggcttccgcatcaccaccgcggccggcgtgcccgccgagctgctg
accgacgacagcaggctgcggcaggtgctgcgcaacctgctgtccaacgcggtgaagttc
accgagaccggcagcgtggagctgcgcatcgagcccgccgacccggccgagctgcccgcg
cccgtgcggcggcacggccaggccatcgccttccgggtggtggacaccggcatcggcatc
gccgagcagcagctggagtcgatcttcggcgcgttccagcaggccgacggcaccacgtcg
cgcaagtacggcggcaccggcctgggcctgtccatcagccgcgagatcgcctacctgctc
ggcggcgtggtgaccgcggagagcaccctgggccggggcagcacgttcaccctctacatg
ccggtcgcgcggcccgagttccaggagctgcccgtcgacgacggcaccgaggtgcccgcc
gcgctgccgccggccgagcagccgaccccggccgacaacggcggcgcgggcgcgcccgcc
caccagcgccggctgctggtgatcgaggagcggccgcagggcctgctgtccctggtcgcc
cagagcgcggtcaccgacctggccgacagcaacgacccgcgcggcccggtcgaggtgatc
accgtggcgggcgcccaggaggccgccgccgtgctcgccgccgaggcgtgccactgcgtc
gtgctggagctggacatgcccgacggcgcggcgctggagttcctcgacgccatggacggc
gacgccgggctgggcaacgtgcccgtcctggcgcacaacaaccggcggctggcgcccgac
caggagcagcgggtccaggcccgcgccggcacccggccgctggagctgctgtccagcctg
gacgagctgcgcgagcgcatcgccctgcacctgaccgccgaggtgccgggcgcggtgctg
ccgctggtgcgccacgaggagccggtgcaccacgccgaaccgcggccggtcaacggcagg
ctgtccgggcgcaccgtgctcatcgccgacgacgacgcgcgcaacctgttcgcgctgagc
agcatcctggagctgcacggggtgagcgtgctgcacgccgagaacggccgggaggccatc
gacgtgctgggcgcgaaccccgaggtggacctggtgctgatggacgtgatgatgccggag
atggacggctacgcggccaccacggcgatccgggccatgcccgagcacgccgacctgccg
atcatcgcggtcaccgccaaggccatgcccggcgaccgggagaagagcatcgactcgggc
gccaacgactacgtcaccaagcccgtggactccgacgacctcgtcaactgcgtgcagcgc
tggttgctggaccgctga
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