Saccharothrix syringae: EKG83_22485
Help
Entry
EKG83_22485 CDS
T06258
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00040
Pentose and glucuronate interconversions
ssyi01100
Metabolic pathways
ssyi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKG83_22485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKG83_22485
Enzymes [BR:
ssyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EKG83_22485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QFZ19826
UniProt:
A0A5Q0H0Q1
LinkDB
All DBs
Position
complement(5186083..5187078)
Genome browser
AA seq
331 aa
AA seq
DB search
MSPLNRRRLLAGSALAAVAATAPRNASAHPTARTHPSVLAAADGFASVNALGSNGTTGGA
GGQAVTVTTGDALADYVGRKEPYVITVSGRIEVDDMLTVVANKTIVGAGSTAEITGGGLQ
LGSTTRPGNNVIIRNLRFTDASDDSISVTNKAHHVWIDHCDLSRGYDGLLDIKRESDYVT
VSWNHFHDHGKTALLGHSDTYTADRGKLRVTYHHNFFDRTDQRHPRVRFGEPVHVYNNYY
RGNSLYGVASTEDAGVVVEGNYFENVAKPVLSGYDKSGPGRVVERDNAYVGSGAPQTLGT
VVEPRTYYAYTLDAASSVPSLVTAGAGVGRI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgttgaaccgccggcgcctgctcgccggctccgcactggccgccgtcgccgcc
accgccccgcgcaacgccagcgcccacccgaccgctcgcacccacccctcggtgctcgcc
gccgccgacggcttcgcctcggtcaacgccctgggctccaacggcaccacgggcggcgcg
ggcggccaggcggtcaccgtcaccaccggcgacgcgctggccgactacgtgggccgcaag
gagccctacgtcatcaccgtctccggccgcatcgaggtcgacgacatgctgaccgtggtc
gccaacaagacgatcgtcggcgcgggttcgaccgccgagatcaccggcggcggcctccag
ctcggctccaccacccgcccgggcaacaacgtgatcatccgcaacctgcgcttcaccgac
gcctcggacgactcgatcagcgtcaccaacaaggcccaccacgtgtggatcgaccactgc
gacctgtcccgcggctacgacggcctgctggacatcaagcgggaatccgactacgtcacc
gtgtcgtggaaccacttccacgaccacggcaagaccgcgctgctcggccactccgacacc
tacaccgccgaccggggcaagctgcgggtcacctaccaccacaacttcttcgaccgcacc
gaccagcggcacccccgcgtccggttcggcgagcccgtgcacgtctacaacaactactac
cggggcaactccctctacggcgtggcgtccacggaggacgcgggcgtggtggtcgagggc
aactacttcgagaacgtggccaagcccgtcctgtccggctacgacaagagcggaccgggc
cgggtggtcgagcgcgacaacgcctacgtcggctcgggcgcaccgcagaccctgggcacg
gtggtcgaaccgcgcacctattacgcctacaccctcgacgcggcgtcgtccgtgccgtcc
ctggtcaccgcgggcgccggggtcggccggatctga
DBGET
integrated database retrieval system