KEGG   Saccharothrix syringae: EKG83_22485
Entry
EKG83_22485       CDS       T06258                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ssyi  Saccharothrix syringae
Pathway
ssyi00040  Pentose and glucuronate interconversions
ssyi01100  Metabolic pathways
ssyi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssyi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    EKG83_22485
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EKG83_22485
Enzymes [BR:ssyi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     EKG83_22485
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-ProteinID: QFZ19826
UniProt: A0A5Q0H0Q1
LinkDB
Position
complement(5186083..5187078)
AA seq 331 aa
MSPLNRRRLLAGSALAAVAATAPRNASAHPTARTHPSVLAAADGFASVNALGSNGTTGGA
GGQAVTVTTGDALADYVGRKEPYVITVSGRIEVDDMLTVVANKTIVGAGSTAEITGGGLQ
LGSTTRPGNNVIIRNLRFTDASDDSISVTNKAHHVWIDHCDLSRGYDGLLDIKRESDYVT
VSWNHFHDHGKTALLGHSDTYTADRGKLRVTYHHNFFDRTDQRHPRVRFGEPVHVYNNYY
RGNSLYGVASTEDAGVVVEGNYFENVAKPVLSGYDKSGPGRVVERDNAYVGSGAPQTLGT
VVEPRTYYAYTLDAASSVPSLVTAGAGVGRI
NT seq 996 nt   +upstreamnt  +downstreamnt
atgagcccgttgaaccgccggcgcctgctcgccggctccgcactggccgccgtcgccgcc
accgccccgcgcaacgccagcgcccacccgaccgctcgcacccacccctcggtgctcgcc
gccgccgacggcttcgcctcggtcaacgccctgggctccaacggcaccacgggcggcgcg
ggcggccaggcggtcaccgtcaccaccggcgacgcgctggccgactacgtgggccgcaag
gagccctacgtcatcaccgtctccggccgcatcgaggtcgacgacatgctgaccgtggtc
gccaacaagacgatcgtcggcgcgggttcgaccgccgagatcaccggcggcggcctccag
ctcggctccaccacccgcccgggcaacaacgtgatcatccgcaacctgcgcttcaccgac
gcctcggacgactcgatcagcgtcaccaacaaggcccaccacgtgtggatcgaccactgc
gacctgtcccgcggctacgacggcctgctggacatcaagcgggaatccgactacgtcacc
gtgtcgtggaaccacttccacgaccacggcaagaccgcgctgctcggccactccgacacc
tacaccgccgaccggggcaagctgcgggtcacctaccaccacaacttcttcgaccgcacc
gaccagcggcacccccgcgtccggttcggcgagcccgtgcacgtctacaacaactactac
cggggcaactccctctacggcgtggcgtccacggaggacgcgggcgtggtggtcgagggc
aactacttcgagaacgtggccaagcccgtcctgtccggctacgacaagagcggaccgggc
cgggtggtcgagcgcgacaacgcctacgtcggctcgggcgcaccgcagaccctgggcacg
gtggtcgaaccgcgcacctattacgcctacaccctcgacgcggcgtcgtccgtgccgtcc
ctggtcaccgcgggcgccggggtcggccggatctga

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