Saccharothrix syringae: EKG83_22490
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Entry
EKG83_22490 CDS
T06258
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00040
Pentose and glucuronate interconversions
ssyi01100
Metabolic pathways
ssyi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKG83_22490
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKG83_22490
Enzymes [BR:
ssyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EKG83_22490
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Glyco_hydro_28
GAP1-N2
Motif
Other DBs
NCBI-ProteinID:
QFZ24423
UniProt:
A0A5Q0HF16
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All DBs
Position
complement(5187089..5188090)
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AA seq
333 aa
AA seq
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MRENTVISRRTLLAGTAATALTAAAGTAANARPATTTRPAWAAPFATADGFAGTDLLGQN
GTTGGVGGPVVTVRDTEAFLDYCDRNEPYVIQVDGIMRFSSKRALRSNKTVIGLPGAEIN
GGGLDVYRRQNVIIRNLRFTGADDDAISIQQSSHHIWIDHCDLGNGADGLVDIVRGADLV
TVSWCHFHDHSKTALLGHSDSNAGPDTGRLRTTFHHNYFDGTAQRHPRVRFGEPIHVYNN
YFRDNALYGVASTENAGVLVEHNHFQNVAHPIYSGYDESGPGRVVERDNVYVGSGAPQTL
GTVVEPRTYYAYTPDNASSVPSLVTAGAGVGRI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ctgagggagaacaccgtgatcagcaggcgcaccctgctcgcgggcaccgccgcgaccgcc
ctgaccgccgccgcgggcaccgcggccaacgcgcgccccgccaccaccacgcgcccggcc
tgggccgcgccgttcgccacggccgacggcttcgccgggaccgacctgctcggccagaac
ggcaccaccggcggcgtgggcggcccggtggtcaccgtgcgggacaccgaggcgttcctc
gactactgcgaccgcaacgagccttacgtcatccaggtcgacgggatcatgcggttcagc
agcaagcgggccctgcggtcgaacaagaccgtcatcggcctgcccggcgccgagatcaac
ggcggcggcctggacgtgtaccgccggcagaacgtgatcatccgcaacctcaggttcacc
ggcgccgacgacgacgcgatcagcatccagcagtcgtcgcaccacatctggatcgaccac
tgcgacctgggcaacggcgcggacggcctggtcgacatcgtgcgcggcgcggacctggtc
accgtgtcgtggtgccacttccacgaccacagcaagaccgcgctgctcggccactcggac
tccaacgcgggcccggacaccggcaggctgcgcaccacgttccaccacaactacttcgac
ggcaccgcgcagcggcacccgcgggtgcgcttcggcgagccgatccacgtctacaacaac
tacttccgcgacaacgcgctgtacggcgtggcgtccaccgagaacgccggtgtgctggtc
gagcacaaccacttccagaacgtcgcgcacccgatctactccggctacgacgagagcgga
ccgggtcgggtggtcgagcgcgacaacgtctacgtcggctcgggcgcaccgcagaccctg
ggcaccgtggtcgaaccgcgcacctactacgcctacacccccgacaacgcctcctcggtg
ccgtccctggtcaccgcgggcgccggcgtcggccggatctga
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