Saccharothrix syringae: EKG83_24380
Help
Entry
EKG83_24380 CDS
T06258
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EKG83_24380
Enzymes [BR:
ssyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EKG83_24380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QFZ20136
UniProt:
A0A5Q0H1K6
LinkDB
All DBs
Position
5636729..5637730
Genome browser
AA seq
333 aa
AA seq
DB search
MWMRGRWSATSWTYLTALDGATGRELQTVRYEPGRHDDGLMRGDYALPRIEPGNRVDRFL
AGVAYRWDGRRLARDWFVDSGWVPVGNPFDDAVHNRNGTSASHGALATQGAHSLSAADVD
GDGRQEVVHGAATVDDGGTLRHSSFGVLPPGSARPGEVERLGHGMVGDVLPDVPGLETWA
SAPGGTGAVGLWSADGRRLSEAIPGTNQGIRWAADLTTQVVDGSGEAEPVVRDWRRGVLL
TATGARADNGTKGNPSLVADVLGDWREELVVRTVDSSALRFCASTEVTGHKMYSLMQDPQ
YRVEVARQQTAYNQPSHPGFHLASDTDWSTVPR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgcgcgggcgctggtcggccacttcgtggacgtacctgacggcgctcgacggt
gcgaccggccgcgagctgcagacggtgcgctacgagccggggcggcacgacgacgggttg
atgcggggcgactacgcgttgccgaggatcgagccgggcaaccgggtggaccggttcctg
gccggggtggcctaccggtgggacggccgccggttggcgcgggactggttcgtcgacagc
gggtgggtgccggtgggcaacccgttcgacgacgcggtgcacaaccgcaacggcacctcc
gcgtcgcacggggcgctggccacgcagggcgcgcactcgctgagcgcggcggacgtcgac
ggcgacggcaggcaggaggtcgtccacggcgcggccacggtcgacgacggcgggacgctg
cgccacagctcgttcggcgtgctgccgccgggcagcgcgcggccgggcgaggtggagcgg
ctggggcacggcatggtgggcgacgtgctgccggacgtgccggggttggagacgtgggcg
tcggcgccgggcgggaccggggcggtgggcctgtggtcggccgacgggcgccggttgtcg
gaggcgatcccggggaccaaccagggcatccggtgggcggcggacctgaccacgcaggtg
gtggacggttcgggcgaggcggagccggtggtgcgggactggcggcgcggggtgctgctg
accgcgaccggtgcgcgggccgacaacgggacgaagggcaacccgtcgctggtggccgac
gtgctgggcgactggcgggaggagctggtggtgcgcacggtcgacagctcggcgctgcgg
ttctgcgcgagcaccgaggtgaccgggcacaagatgtactcgttgatgcaggacccgcag
taccgggtggaggtcgcgcggcagcagaccgcctacaaccagccgtcccacccggggttc
cacctggcctcggacaccgactggtcgacggtgccgcgctga
DBGET
integrated database retrieval system
