Saccharothrix syringae: EKG83_34120
Help
Entry
EKG83_34120 CDS
T06258
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssyi03051
]
EKG83_34120 (pafA)
Enzymes [BR:
ssyi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
EKG83_34120 (pafA)
Proteasome [BR:
ssyi03051
]
Prokaryotic proteasome
Bacterial regulatory particles
EKG83_34120 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QFZ21767
UniProt:
A0A5Q0H6D5
LinkDB
All DBs
Position
complement(8258468..8259826)
Genome browser
AA seq
452 aa
AA seq
DB search
MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGSRLYLDVGS
HPEYATAECDDLAQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVARAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSEVTTLLKVGSTNLVLEMIEQGVQF
RDFSLDNSIRAIREISHDLTGRRTVRLAGGKEASALDIQREYYERAVEHVAKRAPDPMAE
RVLELWGRTLDAVEAQDLSKIDREIDWAIKHRLMERYQAKHDMDLSNPRIAQLDLAYHDI
RRGRGIFDLLQRKGQVDRVTDDGEIEAAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRAVDERVERLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatcttcggcattgagactgagttcggggtgacctgcaccttccacggg
cagcgcaggctgtccccggatgaggtcgcgcggtatctgttccgccgggtggtctcgtgg
gggcgttcgtcgaacgtcttcctgcggaacggctctcggctctacctggacgtgggttcg
caccccgagtacgcgaccgcggagtgcgacgacctcgcccagctggtgacgcacgacaag
gcaggtgagcggatcctcgaagacctgctcgtcgacgccgagcgcaggctcgccgacgag
ggcatcgggggggacatcttcctgttcaagaacaacaccgactccgcgggcaactcgtac
ggctgccacgagaactacctggtcgcgcgggcgggggagttctcccgcatcgccgacgtc
ctgctgccgttcctggtgaccaggcagctgatctgcggcgcgggcaaggtgctccagacg
ccgcgcggcgcggtctactgcctgtcgcagcgggccgagcacatctgggagggcgtgtcc
agcgccaccacccggtccaggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagcgctaccgcaggctccacgtgatcgtgggcgactcgaacatgtccgaggtcaccacg
ctgctcaaggtgggcagcacgaacctggtgctggagatgatcgagcagggcgtccagttc
cgcgacttcagcctggacaactcgatccgggcgatccgcgagatcagccacgatctgacc
ggccgccgcaccgtgcgcctggcgggcggcaaggaggcgtcggcgctcgacatccagcgc
gagtactacgagcgcgcggtggagcacgtggccaagcgggcaccggacccgatggccgag
cgggtgctggagctgtggggccgcacgctggacgcggtcgaggcgcaggacctgtccaag
atcgaccgcgagatcgactgggccatcaagcaccggctgatggagcgctaccaggccaag
cacgacatggacctgtccaacccgcgcatcgcccagctcgacctcgcctaccacgacatc
cggcgcggtcgcggcatcttcgacctgctccagcgcaaggggcaggtggaccgggtgacc
gacgacggcgagatcgaggccgccaaggacaccccgccgcagaccacgcgggccaagctg
cgcggcgacttcatcgccgccgcccaggccgcgggccgcgacttcaccgtggactgggtg
cacctgaagctgaacgaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgcgcg
gtggacgagcgcgtggagcggttgatctcgtccctctag
DBGET
integrated database retrieval system
