Saccharothrix syringae: EKG83_34820
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Entry
EKG83_34820 CDS
T06258
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00750
Vitamin B6 metabolism
ssyi01100
Metabolic pathways
ssyi01240
Biosynthesis of cofactors
Module
ssyi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
EKG83_34820 (pdxS)
Enzymes [BR:
ssyi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
EKG83_34820 (pdxS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
NanE
Dus
NMO
IGPS
DHO_dh
TetR_C_27
Glu_synthase
FMN_dh
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
QFZ24691
UniProt:
A0A5Q0HEV0
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All DBs
Position
complement(8419146..8420060)
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AA seq
304 aa
AA seq
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MAVTTSPDTGAQVTGTSRVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPA
DIRAQGGVSRMSDPDMIDGIINAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEVLTPA
DYANHIDKWQFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIRAE
IRRLQNLPADELYVAAKELQAPYELVREVAEAGKLPVVLFTAGGIATPADAAMMMQLGAE
GVFVGSGIFKSGNPAQRAEAIVKATTFYDDPDVIAKVSRGLGEAMVGINVDEIPQPHRLA
ERGW
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttggccgtgaccacttcacccgacaccggcgcccaggtcaccggtacttcccgcgtcaag
cggggcatggcggagatgctcaagggcggcgtgatcatggacgtggtcaccccggagcag
gccaagatcgccgaggacgcgggcgccgtggccgtcatggcgctggagcgcgtgcccgcc
gacatccgcgcgcagggcggcgtgtcccggatgagcgacccggacatgatcgacggcatc
atcaacgcggtgtccatcccggtgatggccaaggcccgcatcggccacttcgtcgaggcc
caggtgctccagtcgctgggcgtcgactacatcgacgagtccgaggtgctgaccccggcc
gactacgccaaccacatcgacaagtggcagttcaccgtgcccttcgtgtgcggcgcgacg
aacctgggcgaggcgctgcggcggatcaccgagggcgcggcgatgatccggtccaagggc
gaggccggcaccggtgacgtctccaacgccaccacgcacatgcgcaagatccgcgcggag
atccggcggctgcagaacctgccggccgacgagctgtacgtggcggcgaaggagctgcag
gcgccgtacgagctggtgcgggaggtcgcggaggccgggaagctgccggtcgtgctgttc
accgccggtggcatcgccaccccggccgacgcggcgatgatgatgcagctcggtgcggag
ggcgtgttcgtcgggtcggggatcttcaagtccgggaacccggcgcagcgggccgaggcg
atcgtgaaggcgaccaccttctacgacgaccccgacgtgatcgccaaggtgtcgcgcggg
ctgggtgaggcgatggtcggcatcaacgtcgacgagatcccgcagccgcaccggttggcc
gagcggggctggtaa
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