Saccharothrix syringae: EKG83_36395
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Entry
EKG83_36395 CDS
T06258
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
ssyi
Saccharothrix syringae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
Viral_helicase1
AAA_19
RNase_H_2
UvrD_C_2
NAT10_TcmA_helicase
SLFN-g3_helicase
NPHP3_N
nSTAND3
IstB_IS21
AAA_22
AAA_16
PIF1
AAA_25
NACHT
MeaB
Motif
Other DBs
NCBI-ProteinID:
QFZ22165
UniProt:
A0A5Q0H8C8
LinkDB
All DBs
Position
8784560..8787997
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AA seq
1145 aa
AA seq
DB search
MPNSAGRLLHSPADLVDLLECEHRTRLTLALAHGLPGAPAPDEPRRPSPEHTGAHERAVL
ARLAEGREVVTVPDTPDAAERTAAALADRVPVIRGATFHADGFHGRADFLVAADLGTGHG
TGHGYEPHGAELAHHATPAAVVRLTAFALALGADAGPHTHLHLADGTTRTFRVADFLPLV
SDLRNRLRARASQPPALPERLWDDERPACATCRFGRHCASGRERDRDLSLVAGIRTDQRR
KLRAAGLATIDALARATAADKPVTMSATTFQGLRAQAALQVVQDRSRTAANPTGEVAFEL
VAPEALAALPVPDPGDLFLDVAGYPHALDGEGLEFLFGAVDAEGAFTPSWAHTRPAEKAA
FEGFVDLVVGRLEANPGAHVYHYTPHEVEALKRLAALHGTREDAVDHLLRSGALVDLHAV
VRKALRVSQRSYSIRHLEPLFAPGRTPTALPGAEAYEEYLALREVDPERAGEVLAGIAGG
VAADCAATLRLYRFLLDVRAEAGVQPHVPEPSFTQEIEDELAAQRRAERAARLAAVVDPL
LEGLPDNPAEATDDERARALLAAAVGYHRRETNPAWWDFFRRMAAPLPELEADSACAVPV
SVRADDWVLPSGRVRRAKREVRVWCDPERPHPFAPGDQVRLLYKGTPNRSRDAVVLAESA
EDVVLQESTAPDEVDGEQPIAVLPGSPVRPTPKDEAVYDLAAAVVDVLPELPPHPGVDLV
RRTPPRLRTGALPRSGDVIADVIAAVDALEGSTLAVQGPPGAGKTYLAGRLIAHLIRGGR
SVGVTSTSHKAVENVLSAALAAGRELGVPIPTAKRPKGTPARECAWEQPRDNPALVRWRN
DQGAGHLVGGTAWTFANTALREQPFDVLIVDEAGQFALADALAVSTCARNLVLLGDPQQL
PQVVQGTHPAGAEASALGHLIGDADVIPPELGYFLDQTRRMHPAVCEPVSNLSYAGLLHA
HPSAAARGVAGVPPGVYLRSVEHSGNTTSSAEEAAAVVGVVRSLMGRMWTDGPGARALDE
DDFLVVAPYNVQVRLVRRLLEKQGYEGVRVGTVDRFQGQEAPVVITTMTSSAAVDLPRGL
DFLLSRNRLNVALSRAQAVAVVVCSPRLVEADVRDVDQLRLVSGMIGLMAGAASWDIHDI
YDQDL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgcccaactccgccggccgcctcctgcactcccccgcggacctggtggacctgctggag
tgcgagcaccgcacccgcctcaccctggccctggcccacggcctccccggcgcccccgca
ccggacgagccccgccgcccctcccccgagcacaccggggcccacgagcgggccgtgctg
gcccgcctggccgagggccgcgaagtcgtcaccgtccccgacaccccggacgccgccgag
cgcaccgccgccgccctggccgaccgcgtccccgtgatccggggcgccaccttccacgcc
gacggcttccacggccgcgccgacttcctggtcgccgccgacctcggcaccgggcacggc
accgggcacggctacgagccgcacggcgcggagctcgcccaccacgccaccccggccgcc
gtggtgcggttgaccgcgttcgcgctggccctgggggccgacgcgggcccgcacacccac
ctgcacctggccgacggcaccacccgcaccttccgggtcgccgacttcctgccgctggtc
agcgacctgcgcaaccggttgcgcgcccgcgcgtcccagccgcccgccctgcccgagcgg
ctgtgggacgacgagcgcccggcctgcgcgacctgccgcttcggccgccactgcgcgtcc
gggcgcgagcgggaccgggacctgtcgctggtcgcgggcatccgcaccgaccagcgccgc
aagctccgcgcggcggggctggccacgatcgacgcgctggcccgcgccaccgccgccgac
aagccggtcaccatgtcggccacgacgttccagggcctgcgcgcgcaggccgcgctccag
gtggtccaggaccgttcccgcacggcggcgaacccgaccggcgaggtggcgttcgagctg
gtcgcgcccgaggcgctggccgcgctgccggtgcccgaccccggcgatttgttcctggac
gtggcgggctacccgcacgcgctcgacggcgaggggctggagttcctgttcggcgcggtg
gacgccgagggcgcgttcacgccgtcctgggcccacacccggcccgcggagaaggccgcg
ttcgaggggttcgtcgacctcgtggtcgggcggctggaggccaacccgggcgcgcacgtc
taccactacaccccgcacgaggtggaggcgctgaagaggctggccgcgctgcacggcacc
cgtgaggacgccgtcgaccacctgctgcggtccggcgcgctggtggacctgcacgcggtg
gtgcgcaaggcgctgcgggtgtcgcagcgctcgtactcgatccggcacctggaaccgctc
ttcgcgcccggtcgcaccccgaccgcgctgcccggcgccgaggcgtacgaggagtacctg
gcgctgcgcgaggtggacccggagcgcgccggggaggtcctggccggcatcgccggcggc
gtggccgccgactgcgccgccaccctgcggctgtaccggttcctgctcgacgtccgcgcc
gaggcgggcgtgcagccgcacgtgcccgagccgtcgttcacgcaggagatcgaggacgag
ctggccgcgcagcgccgggccgagcgggcggcgcggctggccgccgtggtcgacccgctg
ctggaggggctgccggacaaccccgcggaggccaccgacgacgagcgcgcgcgggcgctg
ctggccgccgccgtcggctaccaccggcgcgagaccaacccggcgtggtgggacttcttc
cggcggatggccgcgccgctgcccgagctggaggcggacagcgcgtgcgcggtgcccgtg
tcggtgcgcgccgacgactgggtgctgccgtccgggcgggtgcgccgggccaagcgcgag
gtgcgcgtgtggtgcgacccggagcgaccgcacccgttcgccccgggcgaccaggtccgg
ctgctctacaagggcacgcccaaccgcagccgggacgcggtggtgctcgccgagtcggcc
gaggacgtcgtgctccaggagagcaccgcgccggacgaggtggacggcgagcagccgatc
gcggtgctgcccggcagcccggtccggcccacgcccaaggacgaggcggtctacgacctg
gcggcggccgtggtggacgtgctgcccgagctgccgccgcaccccggcgtggacctggtg
cggcgcacgccgccgcggttgcgcaccggggcgctgccgcgctcgggcgacgtgatcgcc
gacgtcatcgcggcggtggacgcgctggagggctcgaccctggccgtgcaggggccgccg
ggcgcgggcaagacctacctggccgggcggctgatcgcgcacctgatccgcggcggtcgc
agcgtcggcgtgacctcgaccagccacaaggccgtggagaacgtgctgtcggccgcgctg
gcggcggggcgcgagctgggcgtgccgatcccgaccgcgaagcggcccaagggcacgccc
gctcgcgagtgcgcctgggagcagccgcgggacaacccggcgctggtgcggtggcgcaac
gaccagggcgcggggcacctggtgggcggcaccgcgtggacgttcgccaacaccgcgctg
cgcgagcagccgttcgacgtgctgatcgtggacgaggccgggcagttcgcgctggccgac
gcgctggccgtgtcgacgtgcgcgcgcaacctcgtgctgctgggcgacccgcagcagttg
ccgcaggtcgtgcagggcacgcacccggcgggcgcggaggcgtcggcgctcgggcacctg
atcggcgacgccgacgtgatcccgccggagctgggctacttcctcgaccagacgcggcgg
atgcacccggcggtgtgcgaaccggtgtcgaacctgtcctacgccgggctgctgcacgcc
caccccagcgccgccgcacggggtgtggccggcgtgccgcccggggtgtacctgcggtcg
gtggagcactccggcaacaccacgtcgtcggccgaggaggcggcggccgtggtgggggtg
gtgcggtcgctgatgggtcgcatgtggacggacgggccgggcgcgcgggcgctggacgag
gacgacttcctggtcgtggccccgtacaacgtgcaggtgcggctggtgcggcggctgctg
gagaagcaggggtacgagggggtgcgggtcggcacggtggaccggttccaggggcaggag
gcgcccgtggtgatcaccaccatgacgtcgtcggcggccgtcgacctgccgcgcggcctg
gacttcctgctgtcgcgcaaccggttgaacgtggcgctgtcgcgggcgcaggccgtcgcg
gtcgtggtgtgctcgccgaggctggtggaggccgacgtgcgcgacgtcgaccagctccgt
ttggtctccgggatgatcggcctgatggctggcgccgcttcgtgggacatccacgacatc
tatgaccaagacctatga
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