Saccharothrix syringae: EKG83_37110
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Entry
EKG83_37110 CDS
T06258
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssyi03021
]
EKG83_37110
Transcription machinery [BR:
ssyi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EKG83_37110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_3
HTH_Crp_2
Sigma70_ECF
DUF7343
HTH_24
MarR
DUF134
HTH_AraC
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
QFZ22298
UniProt:
A0A5Q0H7S8
LinkDB
All DBs
Position
8935097..8935819
Genome browser
AA seq
240 aa
AA seq
DB search
MNAVDYQPLFHEMAASDGLRHQELRDRLVTEHLPMARHIADRFAERGESVEDLRQVAAVG
LINAVDRFDPSRGIDFLAFAVPTITGEVRRYLRDQGWAVRVPRRLKELCTAIDGARVELA
RRSGRTPKPSEVARYLGVPLDEVYEGLHAASAHHLLSLDEELANSGGPAADDPALEVVEL
QHALDPMLRGLPKRERRIVVLRFYQNMTQSQIADTVGISQMHVSRLLSRSLARLRDLLDD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgtcgactaccagccgttgttccacgagatggcggcgtccgacgggctccgg
caccaggagctgcgcgaccggctggtcaccgagcacctgccgatggccaggcacatcgcc
gaccggttcgccgagcgcggcgagtccgtggaggacctgcggcaggtggccgcggtcggg
ctgatcaacgcggtggaccggttcgacccgtcgcgcgggatcgacttcctggcgttcgcc
gtgcccacgatcaccggcgaggtgcggcggtacctgcgggaccagggctgggcggtccgc
gtgccgcgcaggttgaaggagctgtgcaccgcgatcgacggcgcccgggtcgagctggcc
cggcggtcggggcgcacgcccaagccgagcgaggtcgcgcggtacctgggcgtaccgctg
gacgaggtgtacgagggcctgcacgcggcgtccgcgcaccacctgctgtcgctggacgag
gaactggccaactccggcggcccggcggccgacgacccggcgctggaggtcgtggagctg
cagcacgccctggacccgatgctgcgcggcctgcccaagcgcgagcggcggatcgtggtg
ctgcggttctaccagaacatgacgcagagccagatcgccgacacggtggggatctcgcag
atgcacgtgtcgcggttgttgagcaggtcgctggcgcgactgcgcgacctgctcgacgat
tga
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