Saccharothrix syringae: EKG83_37125
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Entry
EKG83_37125 CDS
T06258
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyi03032
]
EKG83_37125
03400 DNA repair and recombination proteins [BR:
ssyi03400
]
EKG83_37125
Enzymes [BR:
ssyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EKG83_37125
DNA replication proteins [BR:
ssyi03032
]
Prokaryotic type
DNA Topoisomerases
EKG83_37125
DNA repair and recombination proteins [BR:
ssyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EKG83_37125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
QFZ22301
UniProt:
A0A5Q0H7X0
LinkDB
All DBs
Position
complement(8937769..8938755)
Genome browser
AA seq
328 aa
AA seq
DB search
MRLRRSDPNGPGWHRRARGRGFSYTDADGAPLDAESVERVKALVIPPAWRDVWVCPHPNG
HIQAVGTDSAGRRQYLYHERWRQDRDEEKHERVLDLAPSLPAFRAEVQRELEAGGRSRRK
VLAVALSVLDKGVFRVGGETYVTDNGTHGVATLLCSHVAVRRSGVDFCYPAKGGIEFTTE
VEDPVLARAVRSLLRGRTGSGERLLVDEGGGEVSSDDINERFKELVGGEYSVKDLRTWHA
TVLAAAAFAREGVPGTKTAAKRVEAGVMREVSEHLGNTPAVARKSYVDPRVVELWRGGVV
IRPKSADRETVEKAVWSLLRRKKKRKKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgagactccggcgcagcgacccgaacggccccggctggcaccgccgggcgcggggacgc
ggtttcagctacaccgacgccgacggcgcgcccctcgacgcggagtcggtcgagcgggtc
aaggcgctcgtcatcccgccggcctggcgcgacgtgtgggtgtgcccacaccccaacggg
cacatccaggcggtcggcaccgactccgccgggcggcggcagtacctctaccacgagcgg
tggcggcaggaccgggacgaggagaagcacgagcgggtgctggacctggcgccgtcgctg
ccggcgttccgggcggaggtccagcgcgagctggaggccggcggccgctcgcggcgcaag
gtgctggcggtggcgctcagcgtgctggacaagggcgtgttccgggtcggcggcgagacg
tacgtgacggacaacgggacgcacggcgtggcgacgctgctgtgctcgcacgtggcggtg
cggcggtccggggtggatttctgctacccggccaagggcgggatcgagttcaccaccgag
gtggaggacccggtgctggcgcgggcggtgcggtcgctgctgcgggggcggaccgggagc
ggcgagcggctgctggtcgacgagggcgggggcgaggtctcgtcggacgacatcaacgag
cggttcaaggagctggtcgggggcgagtactcggtgaaggacctgcggacgtggcacgcg
acggtgctcgcggcggcggcgttcgcgcgggagggggtgccggggacgaagaccgcggcg
aagcgggtggaggcgggggtgatgcgggaggtgtcggagcacctggggaacacgccggcg
gtggcccggaagtcctacgtcgacccgcgggtggtggagctgtggcggggcggcgtggtg
atcaggccgaagtcggctgatcgtgagacagtggagaaggctgtgtggtcgctgttgcgg
cggaagaagaagcggaagaaggggtag
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integrated database retrieval system
