Saccharothrix syringae: EKG83_38320
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Entry
EKG83_38320 CDS
T06258
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyi03000
]
EKG83_38320
Transcription factors [BR:
ssyi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EKG83_38320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_IclR
HTH_9
HTH_3
HTH_24
HTH_26
HTH_Tnp_ISL3
Crp
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QFZ22504
UniProt:
A0A5Q0H979
LinkDB
All DBs
Position
9202385..9203392
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AA seq
335 aa
AA seq
DB search
MSRATVRDVARATGLSIATVSRVLNGQANVAQHTREAVLRAVDQLGARAPRPRGAKPTGS
IYVRCPYLLTDYFGLIVSSVAETLALHGHQVVLSAGTSAQRARVLPDLAGRADVGGAVLI
LPPEPAEELVRLRDRRFPFVVVDPRTELPRDVASVSAAHFAGARRLMAHLVELGHRRIGV
LGGPRDWQASDGRLAGYAAALSDVGVLPSPELLRHVDEPTDEQGHRVAGELLDLPERPTA
LVAFNDKMAVGALRAARERGLSVPGDVSVAGFDDLDLSRATRPELTTVRQPLQEMGRMAV
TLLVRLLDRHELEALHVELATELVVRASTGPVPHR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcgacggtgcgggacgtggcgcgggcgacggggctgtcgatcgccacggtc
tcgcgggtgctcaacggccaggccaacgtcgcccagcacacccgcgaggcggtgctgcgg
gccgtggaccagctcggcgcgcgggcgccgaggccgcggggcgccaagcccaccggctcg
atctacgtgcgctgcccgtacctgctcaccgactacttcggcctgatcgtgtcctcggtc
gccgagacgctggccctgcacggccaccaggtggtgctcagcgcgggcacctcggcgcag
cgggcgcgggtgctgccggacctcgcgggccgggccgacgtgggcggcgcggtgctgatc
ctgccgccggagccggccgaggagctggtgcggctgcgcgaccggcggttcccgttcgtg
gtggtggacccgcgcacggagctgccgcgcgacgtggcgtcggtgtccgcggcgcacttc
gcgggcgcgcggcggctgatggcgcacctggtggagctggggcaccggcggatcggcgtg
ctgggcgggccccgggactggcaggcgagcgacgggcggctggccgggtacgcggcggcg
ctgtcggacgtgggcgtgctgccctcgccggagctgctgcggcacgtggacgagccgacc
gacgagcagggccaccgggtcgcgggcgagctgctggacctgcccgagcggccgaccgcg
ctggtggcgttcaacgacaagatggccgtgggcgcgttgcgggcggcccgggagcgcggg
ctgtccgtgcccggcgacgtgtcggtggccggtttcgacgacctggacctgagccgggcc
acccggccggagctgaccacggtgcggcagccgttgcaggagatgggccggatggccgtg
accctgctggtgcgcctcctggaccggcacgagctggaggcgttgcacgtggagctggcc
acggaactggtggtcagggcgtcgacggggcccgtgccgcaccgctga
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