Saccharothrix syringae: EKG83_39100
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Entry
EKG83_39100 CDS
T06258
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssyi03016
]
EKG83_39100
Enzymes [BR:
ssyi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EKG83_39100
Transfer RNA biogenesis [BR:
ssyi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EKG83_39100
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QFZ22641
UniProt:
A0A5Q0H8V3
LinkDB
All DBs
Position
complement(9366325..9366798)
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AA seq
157 aa
AA seq
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MNLFTALFPPPEAVAELDGALDPLRRAHPRLRWADPARWHVTVRFFGPVDPDAHHAAHLA
DLAGVPAPTLRLAGSGHFRQVLWIGVEGPLAELGEAARVVDWHPHLTVARARRRDDELPL
PAFTGREWTATEVALVRSGPPAGYTVLDRVPLSTPNG
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctcttcaccgccctcttcccgccccccgaggcggtggccgagctggacggggcg
ctggacccgctgcgccgggcccacccccggctgcgctgggccgaccccgcccgctggcac
gtcaccgtccgcttcttcggcccggtcgaccccgacgcgcaccacgccgcgcacctcgcc
gacctggccggcgtgcccgcacccaccctccggctcgccggcagcggccacttccggcag
gtcctctggatcggcgtggagggcccgctggccgagctgggcgaagccgcccgggtggtg
gactggcacccccacctcaccgtcgcccgcgcccgccgccgcgacgacgagctgccgctg
cccgccttcaccggtcgggagtggaccgccaccgaggtcgcgctggtccgcagcggcccg
cccgcgggttacaccgtgctcgaccgcgtgcccttgagcacgccaaacgggtag
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