Saccharothrix syringae: EKG83_39970
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Entry
EKG83_39970 CDS
T06258
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssyi03036
]
EKG83_39970 (smc)
Chromosome and associated proteins [BR:
ssyi03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
EKG83_39970 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
QFZ22790
UniProt:
A0A5Q0HAG8
LinkDB
All DBs
Position
complement(9537466..9541122)
Genome browser
AA seq
1218 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK
MEDVIFAGTSGRAPLGRAEVTLTIDNSDGALPIDYVEVSITRRMFREGATEYEINGNSCR
LMDIQELLSDSGIGREMHVIVGQGQLAAILESKPEERRAFVEEAAGVLKHRKRKEKALRK
LEAMQANLTRLTDLTAELRRQLKPLGKQAEIARRAQVVQSELRDARMRLLADDLVTQREA
LAREERDEAAARARRAEVEKSLQQAQLQQNELEDQVAADAPRLQQAQDTWYRLSALEERL
RGTVRLAVERERHLSAAVEAPRGGRDPDELEAEAEQTALLEQELQDGVTEARVGLAEAVE
TRAELERVVSAAEKAHLAAVRAIADRREGLARLSGQVEALRSKTGATAEEIERMSTALAE
AVERAEVAAQELAEAREVTGTEDEDDEGLDERHRLAVEADDAARARVEELVRAERAAERD
IASWKARVDALSLGLTRKDGAGALLASRLPGLLGSVAALLTVEPGAEVALAAALGPVADA
VAVASGADAVAALELLKEQDAGRAGLLIGGSGEPDRSGWPALPAGARWAVDVVRAPEALR
PALHRALDRLAVVDDLAGARALVAGHPSVRAVTREGDVLGEDWAVGGSGRSQSVIEVQAA
VDEASEKLALAERALEQSAAALEGARAEQQARRAEVAALKEQLNEAKVRRARSSERLNRL
AAAVRSAEAEAERARAQRAKVEAAREENLLRLAELEERLLVAQEEQELEDEPDTAHRDEL
AAELASARQGEVDARLALRTAEERARALQGKAEGLRRAARAEREARERAQRAQASRARGA
VVAKAVVRGGELALERIAESLARAARERDAAQERRTRREAYLAQVRSLVREMSVELEKLT
DAVHRDEVLRAEQRMRIEQLETKVADDFGIGLEDLVAEYGPDVPIPPSPQEVAEYEAAKE
RGEAVTAPQPIPYDRDTQARRAKRAERDLSLLGKVNPLALEEFAALEERYKFLSNQLEDI
KATRRDLLTVVKEVDDKILEVFTSAYEDVAREFEVVFKVLFPGGEGRLVLTEPDDMLTTG
IELEARPPGKKVKRLSLLSGGEKSLAAVAMLVAIFRARPSPFYVMDEVEAALDDTNLHRL
IGLFEQLRERSQLLIITHQKPTMEIADALYGVSMRGDGISQVISQRLRGREEKAAKPKEK
ATAGAEPEPEAEPEPEPA
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcaagagcctgacgctgaagggcttcaagtccttcgcctcggctaccacgctg
cgcttcgagcccggcatcacctgcgtggtcggccccaacgggtccggcaagtcgaacgtg
ctcgacgcgctccgctgggtgatgggcacgcagggcgccaaggacctgcgcggcggcaag
atggaggacgtcatcttcgccggcacgtccggccgcgcgccactcggccgcgccgaggtg
accctgaccatcgacaactccgacggcgcgctgccgatcgactacgtcgaggtgtcgatc
acccgccggatgttccgcgagggcgccaccgagtacgagatcaacggcaactcgtgccgg
ttgatggacatccaggaactgctcagcgactccggcatcggccgcgagatgcacgtgatc
gtcggccagggccagctcgccgcgatcctggagtccaagccggaggagcggcgggcgttc
gtcgaggaggccgcgggcgtcctcaagcaccgcaagcgcaaggagaaggcgctgcggaag
ctggaggcgatgcaggcgaacctgacccgcctgaccgacctcaccgccgagctgcgccgc
cagctcaagcccctgggcaagcaggccgagatcgcccggcgcgcgcaggtcgtgcagtcc
gagctgcgggacgcgcggatgcgcctgctcgccgacgacctggtgacccagcgcgaggcg
ctggcgcgcgaggagcgggacgaggcggcggcccgcgcccggcgggccgaggtggagaag
tcgctccagcaggcgcagctccagcagaacgagctggaggaccaggtcgcggccgacgcg
ccgcggctccagcaggcccaggacacctggtaccggctctccgcgctggaggagcggctg
cgcggcacggtgcggctggccgtggagcgggaacggcacctgtcggcggccgtggaggcg
ccgcgcggcgggcgcgacccggacgagctggaggccgaggccgagcagaccgcgctgctg
gagcaggagctccaggacggcgtgaccgaggcccgggtcgggctggccgaggccgtggag
acccgcgccgagctggagcgcgtggtgtccgcggcggagaaggcgcacctggccgccgtg
cgcgcgatcgccgaccggcgcgagggcctggcccggctgtccgggcaggtcgaggcgctg
cggtcgaagacaggcgcgaccgccgaggagatcgagcgcatgtccaccgcgctggccgag
gcggtggagcgggcggaggtggcggcgcaggagctggccgaggcccgcgaggtgaccggc
accgaggacgaggacgacgagggcctggacgagcggcaccggctggccgtggaggccgac
gacgcggcacgcgcgcgggtcgaggagctggtcagggccgagcgcgcggccgagcgcgac
atcgcgtcgtggaaggccagggtggacgcgctgtcgctgggcctgacccgcaaggacggc
gcgggcgcgctgctggcgtcccggctgccgggcctgctcgggtcggtggcggcgctgctg
accgtcgagccgggcgccgaggtggcgctggccgcggccctgggaccggtcgcggacgcg
gtggcggtggcctccggcgccgacgcggtggccgcgctggaactgctcaaggagcaggac
gccgggcgcgccgggctgctgatcggcggctccggcgagccggaccgctccggttggccc
gcgctgcccgccggcgcgcggtgggcggtggacgtggtgcgggcgcccgaggcgctgcgg
cccgcgctgcaccgggcgctggaccggctggccgtggtcgacgacctggccggggcgcgg
gcgctggtggccgggcacccgtcggtgcgggcggtgacccgcgagggcgacgtgctgggc
gaggactgggcggtcggcgggtccgggcgcagccagagcgtcatcgaggtccaggccgcg
gtggacgaggcgtcggagaagctggcgctggccgaacgcgcgctggagcagtccgcggcc
gccctggagggcgcgcgggccgagcagcaggcgcgccgcgccgaggtcgccgcgctgaag
gagcagctgaacgaggccaaggtgcgccgcgcccggtcctcggaacggctcaaccggctg
gccgcggcggtgcgctcggccgaggccgaggcggagcgggcccgcgcgcagcgcgcgaag
gtcgaggccgcccgcgaggagaacctgctccggctcgccgagctggaggagcgcctgctg
gtcgcgcaggaggagcaggagctggaggacgagccggacaccgcgcaccgcgacgagctg
gccgcggagctggcgtccgcccggcagggcgaggtggacgcgcggctggcgctgcgcacc
gccgaggagcgcgcccgggcgttgcagggcaaggcggagggcctgcggcgcgccgcccgc
gccgagcgcgaggcgcgggaacgcgcccagcgggcccaggcgtcccgggcgcggggcgcg
gtggtggccaaggccgtggtgcgcggcggcgagctggcgctggagcggatcgccgagtcg
ctggcgcgggccgcccgcgagcgcgacgccgcgcaggagcgccggacccggcgcgaggcg
tacctggcgcaggtgcgcagcctggtccgggagatgtcggtggagctggagaagctgacc
gacgccgtgcaccgggacgaggtgctgcgcgccgagcagcggatgcgcatcgagcagctg
gagaccaaggtcgccgacgacttcggcatcggcctggaggacctggtcgccgagtacggg
ccggacgtgccgatcccgccgtcgccgcaggaggtggccgagtacgaggccgccaaggag
cgcggcgaggcggtcaccgcgccgcagcccatcccgtacgaccgcgacacccaggcccgg
cgcgccaagcgggccgagcgggacctgtcgctgctgggcaaggtcaacccgctggcgctg
gaggagttcgcggcgctggaggagcggtacaagttcctgtccaaccagctggaggacatc
aaggcgacccggcgcgacctgctgaccgtggtcaaggaggtcgacgacaagatcctggag
gtcttcacgtcggcctacgaggacgtggcgcgcgagttcgaggtcgtgttcaaggtgctg
ttccccggcggggagggccggctggtgctgaccgagccggacgacatgctcaccaccggc
atcgagctggaggcccgcccgccgggcaagaaggtcaagcggctgtcgctgctgtccggt
ggcgagaagtcgctggcggcggtggcgatgctggtcgcgatcttccgcgcgcggccctcg
ccgttctacgtgatggacgaggtcgaggccgcgctggacgacaccaacctgcaccggctg
atcgggctgttcgagcagttgcgggagaggtcgcagctgctgatcatcacgcaccagaag
ccgacgatggagatcgccgacgcgctgtacggcgtgtcgatgcgcggggacggcatcagc
caggtgatctcgcagcggttgcgggggcgggaggagaaggcggccaagccgaaggagaag
gcgacggcgggggccgagcccgaaccggaggccgagcccgaacccgagccggcctga
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