Saccharothrix syringae: EKG83_40170
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Entry
EKG83_40170 CDS
T06258
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00260
Glycine, serine and threonine metabolism
ssyi00270
Cysteine and methionine metabolism
ssyi00450
Selenocompound metabolism
ssyi00670
One carbon pool by folate
ssyi01100
Metabolic pathways
ssyi01110
Biosynthesis of secondary metabolites
ssyi01230
Biosynthesis of amino acids
Module
ssyi_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EKG83_40170
00270 Cysteine and methionine metabolism
EKG83_40170
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
EKG83_40170
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EKG83_40170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssyi04147
]
EKG83_40170
Enzymes [BR:
ssyi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
EKG83_40170
Exosome [BR:
ssyi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EKG83_40170
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QFZ22825
UniProt:
A0A5Q0HA64
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Position
complement(9580205..9581326)
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AA seq
373 aa
AA seq
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MNSANGRGSGHGERAERAGERGAWGDGTRVVHSAPAAPGQPFLAGPVFASAYHLGGEDTY
GRAHNPTWRALEAALGELDGGTAVLFPSGMAAVSTLLRVVLAPGDTVVLPADGYFLTRNL
VAEMPVTVLEAPTAGPYPSFEGVRLVLLESPSNPGLDVCDIAALAEAAHAAGALVAVDNT
TATPIGQQPLLLGADVVVSSDTKAVAGHSDVLLGHVSTADPDLVERLRSARTTGGAIPGP
FEAWLVHRGLGTLDLRLTRQAENAAALYEVLKGHPAVANLRWPGSPADPAHEVAVRQMRR
FGGVLTFELADADAVAAFLGRSRLVYASTSFGGLHTSLDRRAQWGDPVPEGLVRLSAGCE
DTADLVADVLGSL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcggcgaacggccgggggagcgggcacggcgagcgggcggagcgggcaggcgag
cggggcgcgtggggggacgggacgcgggtcgtccactccgcgccggccgcgccggggcag
ccgttcctggccggcccggtgttcgcctcggcctaccacctgggcggcgaggacacctac
ggccgcgcgcacaacccgacgtggcgggcgctggaggcggcgctgggcgagctggacggc
ggcacggccgtgctgttcccgtccggcatggcggcggtctcgacgctgctgcgcgtggtg
ctggcgcccggcgacaccgtggtcctgcccgccgacggctacttcctgacccgcaacctg
gtcgccgagatgcccgtcaccgtgctggaggcgcccacggccgggccgtacccgtcgttc
gagggcgtgcggctggtgctgctggagtcgccgtccaacccgggcctggacgtgtgcgac
atcgcggcgctggccgaggccgcgcacgcggcgggcgcgctggtggcggtggacaacacg
accgcgacgccgatcggccagcagccgctgctgctgggcgcggacgtcgtggtcagcagc
gacaccaaggccgtcgccgggcacagcgacgtgctgctcggccacgtctccaccgcggac
cccgacctggtcgagcggctgcggtcggcgcgcaccaccggcggcgcgatccccggcccg
ttcgaggcgtggctggtccaccgcggcctgggcacgctcgacctgcgcctgacccgccag
gcggagaacgccgccgcgctctacgaggtgctcaagggccacccggcggtggccaacctg
cgctggccgggttcgcccgccgacccggcccacgaggtggcggtccggcagatgcggcgg
ttcggcggcgtgctgaccttcgagctggccgacgccgacgcggtcgcggcgttcctgggc
cgctcgcggctggtgtacgcgagcaccagcttcggcggcctgcacacgagcctggaccgg
cgcgcgcagtggggcgacccggtgccggagggcctggtgcggctctcggcgggctgcgag
gacaccgcggacctcgtggcggacgtgctcggttccctctga
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