Saccharothrix syringae: EKG83_40210
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Entry
EKG83_40210 CDS
T06258
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyi03032
]
EKG83_40210
03036 Chromosome and associated proteins [BR:
ssyi03036
]
EKG83_40210
03400 DNA repair and recombination proteins [BR:
ssyi03400
]
EKG83_40210
DNA replication proteins [BR:
ssyi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EKG83_40210
Chromosome and associated proteins [BR:
ssyi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EKG83_40210
DNA repair and recombination proteins [BR:
ssyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EKG83_40210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QFZ22831
UniProt:
A0A5Q0H9D3
LinkDB
All DBs
Position
complement(9589271..9590017)
Genome browser
AA seq
248 aa
AA seq
DB search
MNKAQLIEALAERLGDKKNAAAAVDGIVDVIVRSVHKGEKVNITGFGVFEKRARAARTAR
NPRTGETVKVKKTNVPAFRAGSTFKDVISGTKKLPRVTAPKPAAAAAKPAAAAAGTKAPA
TRGTTARTTTARSTTARSTTARTAAAATKAPATRSKAGSTATAAKAATATKAAPAKTASK
ATAPKSTATKAASTTAAKPAAKKASTAKATTTAAKAASTPATKATTSAAAKPAAKKATTA
KTSAAKKK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcccagctcatcgaggcgctcgccgagcgccttggcgacaagaagaacgcc
gctgccgcggtcgacggcatcgtcgacgtgatcgtccgcagcgtccacaagggcgagaag
gtcaacatcaccggcttcggtgtcttcgagaagcgcgcccgcgcggcccgcaccgctcgc
aacccgcgcaccggtgagaccgtgaaggtcaagaagaccaacgtgcccgcgttccgcgcg
ggttcgacgttcaaggacgtcatcagcggcacgaagaagctgccccgcgtgacggccccg
aagcccgcggccgcggcggccaagcccgcggcggcggcggcggggaccaaggccccggcg
acccgcggcaccaccgcgcgcaccaccacggcgcggtcgaccaccgcgcgcagcaccacc
gcgcgcaccgctgcggcagccacgaaggccccggccacccgcagcaaggccggcagcacg
gcgaccgccgcgaaggcggccaccgccaccaaggccgcgcccgccaagacggcgagcaag
gcgaccgccccgaagtcgaccgccacgaaggcggcctcgacgaccgcggccaagccggcg
gcgaagaaggccagcacggcgaaggccaccaccaccgccgcgaaggcggcttccaccccc
gcgaccaaggccaccacctcggccgcggccaagccggccgccaagaaggccaccacggcc
aagacgtcggctgcgaagaagaagtga
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integrated database retrieval system
