Saccharothrix syringae: EKG83_40750
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Entry
EKG83_40750 CDS
T06258
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ssyi
Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyi03000
]
EKG83_40750
Transcription factors [BR:
ssyi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EKG83_40750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_31
HTH_3
zf-HC2
Motif
Other DBs
NCBI-ProteinID:
QFZ24811
UniProt:
A0A5Q0HF51
LinkDB
All DBs
Position
9711233..9712216
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AA seq
327 aa
AA seq
DB search
MNDVARLAGVSIKTVSRVVNDEAGVHPATAERVLAAIDQLGFRRNLSARNLRRGSSTGTV
GLVLEDVGNPFYSGVTRAVEEIARLRGRQVITGSSDEDPARERELALEFCSRRVDGLLVV
PAGLQHGYLVPEMRAGTPVVFLDRPAGDVVVDTVLVDNVGGTVEAVAHLASFGHRRIAFL
GDAPDIFTANERLRGYREGCARAGIGYHESLVVMGPHDEESVRKALWGLRTMADPATAVV
TGNNRITVHALRALAGAPERPALVGFDDFELADLLSPPVTVIAHDASALGKAAADLLFAR
LDGDCSPPRRVVLPVRLVARGSGEVTA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgtggcgcggctggcgggcgtgagcatcaagaccgtctcgcgcgtggtgaac
gacgaggccggcgtgcacccggccacggccgagcgggtgctggccgcgatcgaccagctc
ggcttccggcgcaacctcagcgcccgcaacctgcgccgcggctcgtcgaccggcaccgtc
gggctggtgctggaggacgtgggcaacccgttctactcgggcgtgacgcgcgcggtggag
gagatcgcccggctgcgcgggcgccaggtcatcaccgggtcgtcggacgaggacccggcg
cgcgagcgcgagctggcgctggagttctgctcgcgccgggtcgacgggctgctggtggtg
cccgccgggctccagcacgggtacctggtgccggagatgcgggccgggacgccggtggtg
ttcctggaccggcccgcgggcgacgtggtggtggacaccgtgctggtggacaacgtcggc
ggcacggtcgaggcggtggcgcacctggcctcgttcgggcaccggcggatcgcgttcctc
ggtgacgcgccggacatcttcaccgccaacgagcgcctgcgcggctaccgcgagggctgc
gcgcgggcgggcatcggctaccacgagtcgctggtggtcatgggcccgcacgacgaggag
tcggtgcgcaaggcgctgtgggggctgcgcaccatggccgacccggcgaccgcggtggtg
accggcaacaaccggatcaccgtgcacgcgctgcgcgccctggccggcgcgcccgagcgg
cccgcgctcgtgggcttcgacgacttcgagctggccgacctgctgtcgccgccggtgacc
gtgatcgcgcacgacgcgagcgcgctcggcaaggcggcggcggacctgctgttcgcccgg
ctcgacggcgactgctcgccaccccggcgcgtcgtgctgccggtcaggttggtggcacgt
ggatcaggagaggtaaccgcatga
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