Saccharothrix syringae: EKG83_41080
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Entry
EKG83_41080 CDS
T06258
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00010
Glycolysis / Gluconeogenesis
ssyi00020
Citrate cycle (TCA cycle)
ssyi00260
Glycine, serine and threonine metabolism
ssyi00280
Valine, leucine and isoleucine degradation
ssyi00310
Lysine degradation
ssyi00380
Tryptophan metabolism
ssyi00620
Pyruvate metabolism
ssyi00630
Glyoxylate and dicarboxylate metabolism
ssyi00640
Propanoate metabolism
ssyi00670
One carbon pool by folate
ssyi00785
Lipoic acid metabolism
ssyi01100
Metabolic pathways
ssyi01110
Biosynthesis of secondary metabolites
ssyi01120
Microbial metabolism in diverse environments
ssyi01200
Carbon metabolism
ssyi01210
2-Oxocarboxylic acid metabolism
ssyi01240
Biosynthesis of cofactors
Module
ssyi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssyi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssyi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
ssyi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ssyi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EKG83_41080 (lpdA)
00020 Citrate cycle (TCA cycle)
EKG83_41080 (lpdA)
00620 Pyruvate metabolism
EKG83_41080 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
EKG83_41080 (lpdA)
00640 Propanoate metabolism
EKG83_41080 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EKG83_41080 (lpdA)
00280 Valine, leucine and isoleucine degradation
EKG83_41080 (lpdA)
00310 Lysine degradation
EKG83_41080 (lpdA)
00380 Tryptophan metabolism
EKG83_41080 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EKG83_41080 (lpdA)
00670 One carbon pool by folate
EKG83_41080 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssyi04147
]
EKG83_41080 (lpdA)
Enzymes [BR:
ssyi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
EKG83_41080 (lpdA)
Exosome [BR:
ssyi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
EKG83_41080 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
Thi4
FAD_binding_3
HI0933_like
FAD_binding_2
DAO
NAD_binding_8
Amino_oxidase
RecQ-1-like_HTH
3HCDH_N
AlaDh_PNT_C
B3
ApbA
Motif
Other DBs
NCBI-ProteinID:
QFZ22981
UniProt:
A0A5Q0H9T5
LinkDB
All DBs
Position
complement(9772422..9773807)
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AA seq
461 aa
AA seq
DB search
MSAHFDVVVLGAGPGGYVAAIRAAQLGLKTAVIEERYWGGVCLNVGCIPSKALLRNAELA
HIFTHEQKTFGIQVDGSVKFDFGAAFERSRKVADGRVKGVHFLMKKNNITEINGWGTFVD
ANTIRVGDDTITFEHAIIAAGATTRLLPGTELSDRVVTYEEQILTRELPGSIIIAGAGAI
GVEFAYVLHNYGVKVTIVEFLDRVVPLEDVEVSTELAKRYKRLGIDVRTSTRVEAIDDSG
EKVRVTVSKDGAQEVLEADKVMQAIGFQPRVEGYGLENTGVELTERGAIAVDGRGRTNVS
NIYAIGDVTAKLMLAHTAESMGIIAAETIAGAETMELDFVMIPRATYCQPQVASFGYTEA
QARDKGFDVQVAKFPFTANGKAHGLGDSAGFVKLISDAKHGELLGAHMIGPDVTELLPEL
TLAQQWDLTVHEVARNVHAHPTLSEAVKEAVHGLAGHMINF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacacttcgacgtcgtggtcctcggtgctgggccaggcgggtacgtcgccgcg
atccgcgcggcccagctgggactgaagacggcggtcatcgaggagcgttactggggcggg
gtgtgcctcaacgtcggctgcatcccgtcgaaggccctcctgcgcaacgcggagctcgcc
cacatcttcacccacgagcagaagaccttcggcatccaggtcgacggttcggtgaagttc
gacttcggcgccgcgttcgagcgcagccgcaaggtcgcggacgggcgcgtcaagggcgtg
cacttcctgatgaagaagaacaacatcaccgagatcaacgggtgggggacgttcgtcgac
gcgaacaccatccgggtgggtgatgacaccatcacgttcgagcacgcgatcatcgcggcc
ggcgccaccacgcgcctcctcccggggacggagctgtccgaccgggtggtgacctacgag
gagcagatcctcaccagggaactgcccgggagcatcatcatcgccggcgcgggcgccatc
ggcgtggagttcgcctacgtgctccacaactacggcgtcaaggtcacgatcgtggaattc
ctcgaccgggtggtgccgctggaggacgtcgaggtctccaccgagctggccaagcggtac
aagcggctcggcatcgacgtgcgcacctccacccgcgtcgaggccatcgacgacagcggc
gagaaggtgcgcgtcaccgtgtcgaaggacggcgcccaggaggtcctggaggccgacaag
gtcatgcaggccatcggtttccagccgcgcgtggagggctacggcctggagaacaccggc
gtggagctgaccgagcgcggcgcgatcgcggtggacggccggggtcgcacgaacgtgtcc
aacatctacgcgatcggggacgtgacggcgaagctgatgctcgcccacaccgccgagtcg
atgggcatcatcgcggcggagaccatcgcgggcgcggagaccatggagctggacttcgtg
atgatcccgcgcgccacctactgccagccgcaggtcgcctcgttcggctacaccgaggcg
caggcccgcgacaagggcttcgacgtgcaggtggccaagttcccgttcaccgccaacggc
aaggcgcacggcctgggcgactcggcgggcttcgtcaagctgatcagcgacgccaagcac
ggcgagctgctgggcgcgcacatgatcggcccggacgtgaccgagctgctgcccgagctg
accctggcgcagcagtgggacctgaccgtgcacgaggtcgcgcgcaacgtgcacgcgcac
cccacgctgagcgaggcggtcaaggaggccgtgcacggcctggccggccacatgatcaac
ttctga
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