Saccharothrix syringae: EKG83_41125
Help
Entry
EKG83_41125 CDS
T06258
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi00300
Lysine biosynthesis
ssyi00470
D-Amino acid metabolism
ssyi01100
Metabolic pathways
ssyi01110
Biosynthesis of secondary metabolites
ssyi01120
Microbial metabolism in diverse environments
ssyi01230
Biosynthesis of amino acids
Module
ssyi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EKG83_41125 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EKG83_41125 (lysA)
Enzymes [BR:
ssyi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EKG83_41125 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QFZ22989
UniProt:
A0A5Q0H9X4
LinkDB
All DBs
Position
complement(9782967..9784391)
Genome browser
AA seq
474 aa
AA seq
DB search
MRAHPAGPRHADVLVPSNTAGNRPSSPEELNRLHPNVWPRNAERGADGVVRFGGVDVRRL
VEEHGTPLFVMDEADFRSRCRDHARAFGDPALVHYASKAFLSVAVARWVAEEGLSIDVCS
GGELAIALRADFPPERIALHGNNKSTAELTAAVEAGVGAVVLDSFHEIARLDHVARERGR
VQPVMIRVTVGVEAHTHEFIATAHEDQKFGFSLSSGDAAEAARRVLKSQGLRLIGLHSHI
GSQIFDASGFEVAARRVIGLLADLRDEHGDEVLEHVGTVDLGGGLGIAYTSDDDPPPPAE
LARQLTNIVSKECEHAGLPVPKIAVEPGRAVVGPGTVTVYEVGTIKDVQLDAGAVRRYVS
VDGGMSDNIRTALYDAVYDCRLVSRAAAEGTGAVLCRVVGKHCESGDVVVRDCWLPDDLA
PGDLIAVAATGAYCYSMASGYNRLPRPALAAVLDGEARLLLRRETEEDLFRLEV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcacccggccggtccccggcacgccgacgtcctggtcccgtcgaacacggcg
ggcaaccggccgtcttcgcccgaagagctgaaccggcttcacccgaacgtgtggcctcgg
aacgccgagcgcggcgccgacggcgtggtccgcttcggcggcgtcgacgtgcggcggctc
gtcgaggagcacggcaccccgctgttcgtgatggacgaggccgacttccgctcccgctgc
cgcgaccacgcgcgcgcgttcggcgacccggcgctggtgcactacgcgtccaaggcgttc
ctgtccgtggcggtcgcccggtgggtcgccgaggagggcctgagcatcgacgtgtgcagc
ggcggcgagctggccatcgcgctgcgcgccgacttcccgcccgagcgcatcgcgctgcac
ggcaacaacaagtcgaccgccgagctgaccgccgcggtcgaggcgggcgtgggcgcggtc
gtgctcgactcgttccacgagatcgcccgcctggaccacgtcgcgcgcgagcgcggccgg
gtgcagccggtgatgatccgggtcaccgtcggtgtcgaggcgcacacgcacgagttcatc
gccaccgcccacgaggaccagaagttcggcttctcgctgtcctccggcgacgccgccgag
gccgcccgccgggtgctcaagagccagggcctgcggctgatcggcctgcacagccacatc
ggctcgcagatcttcgacgccagcggcttcgaggtggccgcccgccgggtcatcggcctg
ctcgccgacctgcgcgacgagcacggcgacgaggtcctggagcacgtgggcacggtcgac
ctgggcggtggcctgggcatcgcctacacctccgacgacgacccgccgccgcccgccgag
ctggcgcggcagctgaccaacatcgtctccaaggagtgcgagcacgcgggcctgccggtg
ccgaagatcgcggtcgagcccggccgcgccgtcgtgggccccggcacggtgaccgtctac
gaggtcggcaccatcaaggacgtgcagctcgacgcgggtgcggtgcgccgctacgtcagc
gtggacggcggcatgagcgacaacatccgcaccgccctctacgacgcggtctacgactgc
cggctcgtctcgcgcgccgccgccgagggcaccggggccgtgctgtgccgggtcgtgggc
aagcactgcgagtccggcgacgtggtcgtgcgcgactgctggctgcccgacgacctcgcg
cccggcgacctgatcgcggtggccgcgaccggcgcctactgctactcgatggccagcggc
tacaaccggctgccccggccggcgctcgccgccgtgctggacggcgaggcccggctgctg
ctgcgccgggagaccgaggaagacctgttccgcctggaggtatga
DBGET
integrated database retrieval system