Saccharothrix syringae: EKG83_42595
Help
Entry
EKG83_42595 CDS
T06258
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
ssyi
Saccharothrix syringae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
QFZ23243
UniProt:
A0A5Q0HBD9
LinkDB
All DBs
Position
10103854..10106202
Genome browser
AA seq
782 aa
AA seq
DB search
MATVPAEVQGPSDAELIDSVRAGAIDAYGQLYERHVGAAYNLARQLARSSAEADDLVSEA
FAKVLDTLRAGRGPDTAFRAYLLTALRHTAYDRTRRERRVELADDVAEVAPEATAVPFAD
TAVAGLERSLAARAFARLPERWQTVLWHTEIEGQSPAEVAPLLGLTANGVSALAYRAREG
LKQAYLQVHLAETQAERCRATVDRLGAWTRGGLSKRETAQVETHLDECADCRALAAELAD
VNGALRGIVAPMVLGAGATGYLAAAAGTAKAAAAGAAAAASAGSASASTGSGGNVLTAAP
RQLLGAAASAAALVIAVVIGLAAGDDEDPAAQVAPLPTTTVRATTAPSPDLSTTQATTTT
TTEPTTTTAPTTTTEPATTTAPTTTTAEPTTEAPPAARPEPRPEPEPEPRPEPEPTPPNL
VPTVPSGFRLTPGADPVEMPITVRNSGQTASVPASAALLLPPGVRSVGAPASFAGGRLAQ
LDGAAGQTVTCPAGTGAVTCATAQGIAPGGTATFLFHLQADWEAVTGRITGTITAGTALS
VAVEVDVEVTPVEDALDLRVRQWHHGFWDPRLDVSVTNTGGRAGAMRLVVESDEHVALVA
LWPGCRRSQHRVVCEQQLARGATFRVPVWVLGLPWRHGVVRVSATLGTAAKSLEVPLEPH
PGHDAEPEPPVGTPPTQAPAPTTTARPAPATTTPPGTTTPAPPTPTGTPTGPTTGPTTPP
TEPRPTSRTEPTSATPEPTTPAPEPEPTPEPTTPAPEPCAPRPPWLPPLLGDLLPGLCPP
PS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccgttcccgctgaggtccagggaccgagcgatgcggagttgatcgactccgtc
cgggccggggcgatcgacgcctacgggcagctctacgaacggcacgtgggcgccgcgtac
aacctggcccgccagctcgcccggtcctccgccgaggccgacgacctggtctccgaggct
ttcgccaaggtgctggacacgctgcgcgccggtcgcgggccggacacggcgttccgcgcc
tacctgctcaccgcgctgcgccacacggcctacgaccggacacgccgggagcgccgggtc
gagctggccgacgacgtcgccgaggtcgcgcccgaggccacggccgtgccgttcgccgac
accgccgtggcgggcctggagcggtcgctggccgcgcgggcgttcgcccggctgcccgag
cgctggcagaccgtgctctggcacaccgagatcgagggccagtcgcccgccgaggtcgcg
ccgctgctgggcctgaccgccaacggcgtgtccgcgctggcctaccgggcccgggaaggg
ctcaagcaggcgtacctccaggtgcacctggccgagacgcaggccgagcggtgccgcgcg
accgtggaccggctgggcgcgtggacccgcggcggcctgtccaagcgggagaccgcccag
gtcgagacccacctggacgagtgcgccgactgccgcgcgctggccgccgagctggccgac
gtcaacggcgcgctgcgcgggatcgtcgcgcccatggtgctgggcgccggcgccaccggc
tacctcgccgccgccgcgggcaccgcgaaggccgccgcggccggtgccgccgccgccgcg
agcgcgggttcggcgtcggcttcgacgggttccggcggcaacgtcctcaccgccgcgccc
cgccagctgctcggcgcggcggcctcggccgcggccctggtgatcgcggtggtgatcggc
ctggccgcgggcgacgacgaggaccccgccgcgcaggtcgcgccgctgccgacgacgacc
gtgcgggcgaccaccgcgccgtcgccggacctgtcgacgacgcaggcgaccacgaccacc
acgaccgaaccgaccaccaccaccgcgccgaccacgaccaccgaaccggcgacgacgacc
gcgcccaccacgaccaccgccgaacccaccaccgaggcgcccccggccgcccgaccggag
ccgcggccggaacccgagcccgaaccgcggcccgagcccgaaccgacgccgccgaacctg
gtgccgaccgtgcccagcgggttccggctgacccccggcgccgacccggtcgagatgccg
atcacggtgcgcaactccggccagacggcctcggtgcccgcgagcgccgcgctcctgctg
ccgcccggcgtgcggtccgtcggcgcgccggcctcgttcgcgggcggccggctcgcccag
ctcgacggcgcggccgggcagaccgtgacctgcccggcgggcaccggcgcggtgacctgc
gccaccgcgcagggcatcgcgcccggcggcaccgccacgttcctgttccacctccaggcc
gactgggaggcggtgaccggccgcatcaccggcaccatcaccgcgggcaccgccctgagc
gtggccgtcgaggtggacgtcgaggtcacgccggtcgaggacgccctggacctgcgggtg
cgccagtggcaccacggcttctgggacccgcggctggacgtctcggtcaccaacaccggc
ggccgggcgggcgcgatgcgcctggtggtcgagtccgacgagcacgtcgcgctggtcgcg
ctgtggcccgggtgccgccggtcgcagcaccgcgtggtgtgcgagcagcagttggcgcgg
ggcgcgaccttccgggtgcccgtgtgggtgctgggcctgccgtggcggcacggcgtggtg
cgggtgagcgcgaccctgggcacggccgcgaagagcctggaggtgccgctcgaaccgcac
cccgggcacgatgccgagccggagccgccggtcggcacgccgccgacgcaggcccccgcg
ccgaccacgaccgcgaggcccgccccggcgacgaccacgccgcccggcaccaccaccccg
gcgccgcccacgccgaccggcacgcccaccgggccgaccaccgggccgaccaccccgccc
accgagccccgacccacctcgcggaccgaaccgacctcggccacgcccgaaccgaccacc
cccgcgccggagccggagccgacccccgagccgaccaccccggcacccgagccgtgcgcg
ccgcggcccccgtggctgcccccgctgctgggcgacctgctgccggggctgtgcccaccc
ccttcgtga
DBGET
integrated database retrieval system
