Saccharothrix syringae: EKG83_43460
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Entry
EKG83_43460 CDS
T06258
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi03420
Nucleotide excision repair
ssyi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKG83_43460 (pcrA)
03430 Mismatch repair
EKG83_43460 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyi03400
]
EKG83_43460 (pcrA)
Enzymes [BR:
ssyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKG83_43460 (pcrA)
DNA repair and recombination proteins [BR:
ssyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKG83_43460 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EKG83_43460 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
Terminase_6N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QFZ23391
UniProt:
A0A5Q0HB11
LinkDB
All DBs
Position
complement(10298068..10300377)
Genome browser
AA seq
769 aa
AA seq
DB search
MSALFDLPSSPPAPRSARLLDDLNPSQRRAVEHAGSPLLVVAGAGSGKTRVLTRRIAHLL
AERGVHPGEVMAITFTNKAAAEMKERVADLVGPRARSMWVSTFHSMCVRLMRREAKTLGM
SSNFSIYDSDDTRRLITLVARDLDLDPKRYPARTLAIHISNLKNELVDAATAAERAGNDL
ERRVAEVYASYQRRLTESNSLDFDDLIMRTVELLQDHPDVAEHYHRRFRHVLVDEYQDTN
HAQYTLVRELVGTGADGVPPGELCVVGDADQSIYAFRGATIRNIVEFERDYPQATTILLE
QNYRSTQTILGAANAVISRNSGRRDKRLWSDLGDGEKIVGYVADNEHDEAQFVANEIDRL
VDSGEANNGEIAVFYRTNNQSRVFEEIFIRLGLPYRVVGGVRFYERREVRDALAYLRALA
NPDDTVSLRRILNVPKRGIGDRAEACVATYAERERINFATALRHAVEGRVPLLNPRSRNA
IAGFVELMDELGQAVERGDDVADVLEAVLERTAYRAELEASEDPQDHTRVENLNELVTVA
REFTDLGTAVPVPDEDEGLPAEGSLAAFLERVSLVADADSVPDAESDGVVTLMTLHTAKG
LEYPVVFCTGWEDGVFPHLRALGDPAELAEERRLAYVGITRAQRRLYLSRSLVRSAWGQP
AANPASRFLDEIPADLVEWRRVEPRRSAPSAPTTWGRGSSSRPAPANTQWKDTPALKLDV
GDRVNHDKYGLGRVVAVDGSGPRATATIDFGGSGTVRLMLIGGVPLVKL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttgttcgacttgccctcaagtccccccgccccccggtccgcgcggctgctc
gacgacctgaacccgtcccagcgccgcgcggtcgagcacgccggctcgccgctgctggtc
gtggcgggtgcggggtccggcaagacccgcgtgctcacccgccgcatcgcccacctgctc
gccgagcggggggtgcaccccggcgaggtcatggcgatcacgttcaccaacaaggccgcc
gccgagatgaaggagcgcgtggccgacctggtgggcccgcgcgcccgctcgatgtgggtg
tccacgttccactcgatgtgcgtgcggctcatgcgccgcgaggccaagacgctcggcatg
tcgtcgaacttctcgatctacgactccgacgacacccgccggctcatcaccctcgtggcg
cgcgacctcgacctggaccccaagcgctacccggcccgcacgctggccatccacatctcg
aacctcaagaacgagctggtggacgccgcgaccgcggcggagcgggcgggcaacgacctg
gagcgccgcgtcgccgaggtctacgcgagctaccagcgcaggctcaccgagtcgaactcg
ctggacttcgacgacctgatcatgaggaccgtcgagctgctccaggaccacccggacgtg
gccgagcactaccaccgccggttccgccacgtgctggtcgacgagtaccaggacaccaac
cacgcgcagtacacgctggtccgcgagctggtcggcaccggcgcggacggcgtgccgccc
ggcgagctgtgcgtggtgggcgacgcggaccagtcgatctacgccttccgcggcgcgacg
atccgcaacatcgtggagttcgagcgggactacccgcaggccaccacgatcctgctggag
cagaactaccggtccacgcagaccatcctcggcgccgcgaacgcggtcatctcgcgcaac
tccggccggcgggacaagcggctgtggagcgacctgggcgacggcgagaagatcgtcggc
tacgtcgcggacaacgagcacgacgaggcgcagttcgtcgccaacgagatcgaccggctg
gtcgactccggcgaggcgaacaacggcgagatcgccgtgttctaccgcaccaacaaccag
tcgcgcgtgttcgaggagatcttcatccgcctcggcctgccctaccgggtcgtcggcggc
gtgcggttctacgagcggcgcgaggtgcgcgacgcgctggcgtacctgagggcgctggcc
aacccggacgacacggtgtcgctgcggcgcatcctgaacgtgcccaagcggggcatcggc
gaccgcgccgaggcgtgcgtggccacctacgccgagcgcgagcggatcaacttcgcgacg
gccctgcgccacgccgtggagggccgggtgccgctgctgaacccgcgctcgcgcaacgcg
atcgccgggttcgtcgagctgatggacgagctggggcaggcggtcgagcgcggcgacgac
gtggccgacgtgctggaggcggtgctggagcggaccgcctaccgggccgagctggaggcc
agcgaggacccgcaggaccacacccgggtggagaacctgaacgagctggtcacggtggcc
cgcgagttcaccgacctgggcacggcggtcccggtgcccgacgaggacgaggggctgccc
gcggagggctcgctggcggcgttcctggagcgggtgtcgctggtcgcggacgcggactcg
gtgccggacgcggagtccgacggcgtggtcacgctgatgaccctgcacaccgccaagggc
ctggagtacccggtggtgttctgcacgggctgggaggacggcgtcttcccgcacctgcgg
gcgctgggcgacccggcggagctggccgaggagcgccggctggcctacgtgggcatcacc
cgcgcccagcggcggctgtacctgtcgcggtcgctggtgcgctcggcgtggggccagccc
gcggcgaacccggcgtcgcggttcctggacgagatcccggcggacctggtcgagtggcgg
cgggtcgagccccggcgctcggcgccgtccgcgcccacgacgtggggccgcggctcgtcg
tcccggcccgcgccggcgaacacccagtggaaggacacgcccgcgctcaagctcgacgtg
ggcgaccgggtgaaccacgacaagtacgggctcgggcgcgtggtggccgtggacggctcc
gggccccgcgcgaccgccacgatcgacttcggcggctccgggacggtccggctgatgctc
atcggcggggtgcccctcgtgaagctctga
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