Saccharothrix syringae: EKG83_43600
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Entry
EKG83_43600 CDS
T06258
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKG83_43600 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyi03019
]
EKG83_43600 (groL)
03110 Chaperones and folding catalysts [BR:
ssyi03110
]
EKG83_43600 (groL)
03029 Mitochondrial biogenesis [BR:
ssyi03029
]
EKG83_43600 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssyi04147
]
EKG83_43600 (groL)
Enzymes [BR:
ssyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EKG83_43600 (groL)
Messenger RNA biogenesis [BR:
ssyi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EKG83_43600 (groL)
Chaperones and folding catalysts [BR:
ssyi03110
]
Heat shock proteins
HSP60 / Chaperonin
EKG83_43600 (groL)
Mitochondrial biogenesis [BR:
ssyi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EKG83_43600 (groL)
Exosome [BR:
ssyi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKG83_43600 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EKG83_43600 (groL)
Exosomal proteins of breast cancer cells
EKG83_43600 (groL)
Exosomal proteins of colorectal cancer cells
EKG83_43600 (groL)
Exosomal proteins of bladder cancer cells
EKG83_43600 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QFZ23416
UniProt:
A0A5Q0HAZ2
LinkDB
All DBs
Position
complement(10330532..10332157)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKQISFDEDARRALERGVNKLADTVKVTLGPRGRHVVLDKKFGGPTVTNDGVTIAREVE
LEDAFENLGAQLAKNVATKTNDVAGDGTTTATVLAQAMVRVGLRNVAAGANPTSLGRGIQ
AAADAVVDALKAKATPVKGRDNIAQVGTVSSRDESIGGLLGEAIEKVGEDGVITVEESST
LATELQITEGVQFDKGYISAHFATDLEAQEAVFEDARVLLHREKISALADLLPILEKVAE
AGKPLVIIAEDVEGEALSTLVVNALRKTLRVVAVKAPYFGDRRKAFLDDLAVVTGATVIS
SEVGLKLSEAGLDVLGSARRIVVSKDETTIVDGGGSKADVAGRAEQLKREIEATDSDWDR
EKLQERLAKLSGGVAVIRVGAATETELKERKHRIEDAVAATKAAVEEGIVPGGGSALVHA
SKVLDGNLDLTGDEATGVAVVREALGSPLFWIAANAGLEGAVVVNKVREQEWGFGLNAAS
LTYGDLLESGIIDPVKVTRSAVANAASIARMVLTTESAVVEKKEEEPAAAAGHGHGHGHG
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagatcagcttcgacgaggacgctcgtcgggcgcttgagcgcggcgtgaac
aagctcgcggacacggtcaaggtgaccctgggcccgcgcggcaggcacgtggtgctcgac
aagaagttcggcgggccgacggtcaccaacgacggtgtgaccatcgcccgcgaggtggag
ctggaggacgcgttcgagaacctcggcgcgcagctggccaagaacgtggccaccaagacc
aacgacgtggccggcgacggcacgacgaccgcgaccgtgctggcccaggccatggtgcgg
gtcggtctgcgcaacgtcgccgcgggcgccaacccgacctcgctgggccgcggcatccag
gccgccgccgacgcggtcgtggacgcgctgaaggcgaaggccacgccggtcaagggccgc
gacaacatcgcgcaggtcggcaccgtgtcgtcccgcgacgagtccattggcggcctgctc
ggcgaggcgatcgagaaggtcggcgaggacggcgtgatcaccgtcgaggagtcctcgacg
ctggccaccgagctgcagatcaccgagggcgtccagttcgacaagggctacatctcggcg
cacttcgccaccgacctggaggcccaggaggcggtgttcgaggacgcccgcgtcctgctg
caccgcgagaagatctcggccctggccgacctgctgccgatcctggagaaggtggccgag
gcgggcaagccgctggtcatcatcgccgaggacgtcgagggcgaggcgctgtccaccctg
gtggtcaacgccctgcgcaagacgctgcgcgtggtcgcggtcaaggcgccgtacttcggc
gaccgccgcaaggcgttcctggacgacctggcggtcgtcacgggcgcgacggtcatctcc
tccgaggtgggcctgaagctgtccgaggccggcctggacgtgctgggctccgcccgccgc
atcgtggtgtccaaggacgagaccacgatcgtcgacggcggcggctcgaaggccgacgtg
gccgggcgcgccgagcagctcaagcgcgagatcgaggccacggactccgactgggaccgc
gagaagctgcaggagcggctggccaagctgtccggcggcgtggcggtcatccgggtcggc
gcggccaccgagaccgagctgaaggagcgcaagcaccgcatcgaggacgccgtcgcggcg
accaaggcggcggtggaggagggcatcgtgcccggcggcggttccgcgctggtgcacgcc
tccaaggtgctcgacggcaacctcgacctgaccggcgacgaggccaccggtgtcgccgtc
gtccgcgaggcgctgggctcgcccctgttctggatcgccgcgaacgcgggcctggagggc
gcggtcgtggtcaacaaggtccgggagcaggagtggggcttcggcctcaacgccgcctcc
ctgacctacggtgacctgctcgaatcgggcatcatcgacccggtcaaggtcacccgctcc
gcggtcgccaacgccgcttccatcgcccgcatggtgctcaccacggagagcgccgtcgtg
gagaagaaggaagaggagccggccgccgccgcgggccacggccacggtcacggccacggc
cactga
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