Saccharothrix syringae: EKG83_43745
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Entry
EKG83_43745 CDS
T06258
Name
(GenBank) AfsR/SARP family transcriptional regulator
Organism
ssyi
Saccharothrix syringae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
TPR_12
TPR_8
NB-ARC
TPR_2
TPR_10
TPR_1
Trans_reg_C
TPR_17
AAA_16
TPR_7
AAA_22
NACHT
TPR_16
TPR_11
TPR_14
TPR_MalT
ATPase_2
AAA_25
TPR-S
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QFZ23439
UniProt:
A0A5Q0HB85
LinkDB
All DBs
Position
complement(10361296..10364010)
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AA seq
904 aa
AA seq
DB search
MAVEFGVLGPLCVKVDGRVVPVPAGRVRVLLAALLLHADEVVPADRLVEWLWDDAPPNPR
RARATLQMVVTRLRQALGEVNVVRTAGAGYVADVPPGSLDLHRYRDLVARGRYAEALAVW
RGEPLPDVRSDLLHREEVAPLLEHRLDVLEKRVGADLAAGRAREVVEELRALTRRYPLRE
SFWAQLVTALHRADRQAEALAAYQEVRAHLARELGVEPGPALREAHRQVLGTGAVVPPRP
GVPRGLPAAPRVFVGRQRALRELDAAAAGPAMVIAAISGPAGVGKTALAVHWAHRAAGRY
PDGQLYANLRGFDPSGQPVSPSDVLGSFLEALDVPPGRIPAALEARASLYRSLLADRAVL
VLLDNARDVDQVRPLLPGSPGCLALVTSRDRLIGLVVQEGARPVRLDLFSPEESAQLLEA
AAGPGRTAAEPEAVDQLVARCAGLPLALAVVAARTATSPVASLRALVEELECCGPLDVLD
TGDRLTAVRDVFSWSYQHLGDAAARVFRLLGLSPGPDISLPATASLAALPVGEARRALAE
LAQAHLVTEHAPGRYTAHDLLRAYAADRAAAELTGAEVRAARLRLLDHFLHTAEHVDRVL
YPQREPVDLPPAADGVVPERVGSHAEALTWFRGELRTLIAVVGYAAEHGFDGHAWRIPLC
MATFLHSGGHWPEWLEVCGAGLAAAGRLGDAHGSAHMHRGLGRANALLHNWAEAEQRLGA
ALELFREVGDRAGEAYVLVNLAGSLELRSRPAEALPLDLRALELFRELGHVPGQARAFTA
IGYLHHELGNLDEAVRYAEAAIELYESITDLPGQAAALENLGLAHRELGRLEEAVVSQRR
ALELFAKSGDRYYEAGAWSGLAETHRRLGDPGAAREALRNALAAFEELRHPHAEEVRARL
EALG
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
gtggcggttgagttcggtgtcctgggtccgctgtgcgtgaaggtggacggccgggtggtg
ccggtgcccgcgggccgggtgcgggtgctgctggccgcgctgctgctgcacgccgacgag
gtcgtgccggccgaccggctggtggagtggctgtgggacgacgcgccgcccaacccgcgg
cgggccagggcgacgctgcagatggtggtgacccggctgcggcaggcgctgggcgaggtc
aacgtggtgcgcacggccggcgcgggctacgtcgccgacgtgccgccggggagcctggac
ctgcaccgctaccgggacctggtggcgcgcgggcggtacgccgaggcgctggcggtgtgg
cggggcgagccgctgccggacgtgcggtcggacctgctgcaccgcgaggaggtcgcgccg
ctgctggagcaccgcctggacgtgctggagaagcgcgtcggggccgacctggccgccggg
cgggcccgcgaggtggtggaggagctgcgcgcgctgacccggcggtacccgctgcgcgag
agcttctgggcgcagctggtgaccgcgctgcaccgcgccgaccggcaggccgaggcgctg
gccgcgtaccaggaggtgcgcgcgcacctggcccgcgagctgggcgtcgagccggggccc
gcgctgcgggaggcgcaccggcaggtgctgggcaccggtgcggtcgtgccgccgcgaccg
ggcgtgccgcgcgggctgcccgcggcgccgcgggtgttcgtcggcaggcagcgggcgctg
cgcgagctggacgccgccgcggccggcccggcgatggtcatcgcggcgatcagcggtccg
gcgggcgtcggcaagaccgcgctcgcggtccactgggcgcaccgggccgccggccgctac
ccggacgggcagctctacgcgaacctgcgcggcttcgacccgtccgggcagccggtgtcg
ccgtccgacgtgctgggctccttcctggaggcgctggacgtgccgcccggccgcatcccg
gccgcgctggaggcccgcgcctcgctctaccgcagcctgctcgccgaccgggccgtgctg
gtgctgctggacaacgcccgcgacgtcgaccaggtccggccgctgctgccgggttcgccg
ggctgcctggccctggtcaccagccgcgaccggctcatcgggctcgtggtgcaggagggc
gcccggccggtgcgcctggacctgttcagccccgaggagtccgcccagctgctggaggcg
gccgcgggcccgggccggaccgcggccgagccggaggcggtcgaccagctcgtcgcccgg
tgcgcgggcctgccgctggccctggcggtggtggccgcccgcacggccacctcaccggtc
gcgtcgctgcgggcgctggtcgaggagctggagtgctgcggcccgctggacgtcctggac
accggcgaccggctcaccgcggtccgcgacgtcttctcctggtcctaccagcacctgggc
gacgcggcggcgcgcgtgttccggctgctgggcctgagcccaggtccggacatctcgctg
cccgccaccgcgagcctggccgcgctgccggtcggcgaggcccgccgggcgctggccgag
ctggcgcaggcccacctggtcaccgagcacgcgcccggccggtacaccgcgcacgacctg
ctgcgcgcctacgccgccgaccgggccgcggccgagctgaccggcgccgaggtccgggcg
gcccggctccggctgctcgaccacttcctgcacaccgccgagcacgtggaccgggtgctc
tacccgcagcgcgagccggtggacctgcccccggcggccgacggcgtggtgcccgagcgc
gtcggctcgcacgccgaggcgctgacctggttccggggcgagctgcgcacgctgatcgcg
gtggtcgggtacgccgccgagcacggcttcgacggccacgcgtggcggatacccctgtgc
atggcgacgttcctgcactccggcggccactggccggagtggctggaggtgtgcggcgcc
ggcctggccgcggccgggcggctgggcgacgcgcacggcagcgcgcacatgcaccgcggc
ctggggcgggccaacgcgctgctgcacaactgggccgaggcggagcagcggctgggcgcg
gcgctggagctgttccgggaggtcggcgaccgggccggggaggcgtacgtgctggtgaac
ctggccgggagcctggagctgaggtcccggcccgccgaggcgctgccgctggacctgcgc
gcgctggagctgttccgcgagctggggcacgtgccggggcaggcgcgggcgttcaccgcc
atcgggtacctgcaccacgagctgggcaacctcgacgaggcggtgcggtacgcggaggcc
gcgatcgagctgtacgagagcatcaccgacctgcccggccaggccgccgccctggagaac
ctgggcctggcccaccgcgagctggggcggctggaggaggcggtggtgtcccagcggcgc
gcgctggagctgttcgcgaagtcgggcgaccgctactacgaggcgggcgcgtggagcggg
ctggccgagacccaccggcgcctgggcgacccgggcgcggcgcgcgaggcgctgcgcaac
gcgctggccgcgttcgaggagctgcgccacccgcacgccgaggaggtgcgcgcgcggctg
gaggcgctggggtga
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