Symphalangus syndactylus (siamang): 129457509
Help
Entry
129457509 CDS
T10134
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03440
Homologous recombination
ssyn03460
Fanconi anemia pathway
Brite
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129457509 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
129457509 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129457509
NCBI-ProteinID:
XP_055088707
LinkDB
All DBs
Position
11:60174497..60210412
Genome browser
AA seq
1188 aa
AA seq
DB search
MFPACADVILILAYLLVELKEKLAFLKREYSKTLARLQRAQRAEKIKHSIKKTVEERDCL
SQQELSPQLNHSEPKNKICVYDKLHIKTHLDEETGEKTSITLDVGPESFNPGDGPGGLPI
QGTDDTQEHFPHRVSDPDGEQKQKLPSRRKKQQKRTFISQERDCVFGTDSLRLSGKRLKE
QEEISSKNPTRSPVTEIRTHLLSLKSELPDSPEPVTEINEDSVLIPPTAQPEKGVDTFLR
RPNFTRATTVPLQTLSDSSSSQHLEHIPPKGSSELTTHGLKNIRFTSPVSLEAQGKKMTV
STDNRLVNKAISKSGQLPTSSNLEANISCSLNELTHNNLPANENQNLKEQNQTEKSLKFP
SDALEGRNENLQENEILSQPKSLSLEATSPLSAEKHSCTMLEDLLFPAEYYVRTTRSMSN
CQRKVALEAVIHSHLDVKKKGFKNKNKDASKNLNLSNEETDQSEIRMSGTCTGQPSSRTS
QKLLSLTKVSSPAGPTEDNDLSRKAVAQVPGRRYRGKRKSACTPASDHCEPLLPTSSPSV
VNRSKEEVTLHKYQHEKLLIQVKGKKSRHQKEDSLSWSNSAYLSLDDDAFTAPFHKDGML
SLKQLLSFLSITDFQLPDEDFGPLKLEKLKSCSEKPVEPFESKMFGEGHLKEGNCIFPEE
LSPKRMDTEMEDLEEDLIVLPGKSHPKRPNPQSHSTKTGLSSSILLYTPLNTVAPEDNDR
PTADVCSPAFPILGTTPAFGPQGSYEKASTEVTGRTCCTPQLAHLKDSVCLASDSKQFDS
SSSPAKPHTTLQVSGRQGQPTCDCDSVPPGTPPPIESFTFKENQLCRNTCQELHKHSVEQ
TETAELPASDSINRGNLQLVSKLKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLW
KALDAWQWEKLHTWHFTEVPVLQIVPVPDVYNLVCVALGNLEIREIRALLCPSDDESEKQ
VLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAE
VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPC
AKESELLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIA
IWDLLLGQCTALLPPISDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagcttgtgctgatgttattcttatcctggcttaccttctggtagagttaaag
gagaaattagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgcc
caaagagctgaaaagattaagcattctattaagaaaacagtagaagaacgagattgtttg
tcccagcaggagctctcaccgcagctaaaccactcagaacctaaaaataaaatatgtgtt
tatgacaagttacacatcaaaacccatcttgatgaagaaactggagaaaagacatctatc
acacttgatgttgggcctgagtcctttaaccctggagatggcccaggaggattacctata
caaggaacagatgacacccaagaacattttccccacagggtcagtgaccctgatggtgag
caaaagcagaagctgccaagcagaagaaagaagcagcagaagagaacatttatttcacag
gagagagactgtgtctttggcactgattcactcagattgtctgggaaaagactaaaggaa
caggaagaaatcagtagcaaaaatcctactagatcaccagtaactgaaataagaactcac
cttttaagtcttaagtctgaacttccagattctccagaaccagttacagaaattaatgaa
gacagtgtattaattccaccaactgctcaaccagaaaaaggtgttgatacattcctaaga
agacctaatttcaccagggctactacagttcctttacagactctatcagatagcagtagt
agtcagcaccttgaacacattcctcctaaaggtagcagtgaacttactactcacggccta
aaaaacattagatttacttcacctgtaagtttggaggcacaaggcaaaaaaatgactgtc
tctacagataaccgccttgtaaataaagctataagtaaaagtggccaactgcccacaagt
tctaatttagaggcaaatatttcatgttctctaaatgaacttactcacaataacttacca
gcaaatgaaaaccaaaacttaaaagaacaaaatcaaacagagaaatctttaaaatttccc
agtgacgctcttgaaggcagaaatgaaaatcttcaggaaaatgagattctaagtcaacct
aagagtcttagcctggaagcaacctctcctctttctgcagaaaaacattcttgcacaatg
cttgaagaccttctgtttcctgcagaatattatgttagaaccacacgaagcatgtccaat
tgccagaggaaagtagccctggaggctgtcattcacagtcatttggatgtcaagaaaaaa
gggtttaaaaataaaaataaggatgcaagtaaaaatttaaacctttccaatgaggaaact
gaccaaagtgaaattaggatgtctggcacatgtacaggacaaccaagttcgagaacttct
cagaaacttctctcattaactaaagtcagctctcccgctgggcccactgaagataatgac
ttgtctaggaaggcagttgcccaggtacctggtagaagatacagaggaaaaagaaaatca
gcctgcaccccagcatcagatcattgtgaaccacttttgccaacttccagcccatcggtt
gttaacaggtccaaggaggaagtcaccttgcacaaatatcagcacgaaaaattacttatt
caagtgaaggggaagaaaagtcgtcatcaaaaagaggattccctttcttggagtaatagt
gcttatttatccttggatgatgatgctttcacggctccatttcataaggatggtatgctg
agtttaaagcaactactgtcttttctcagtatcacagactttcagttacctgatgaagac
tttggacctcttaagcttgaaaaactgaagtcctgctcagaaaaaccagtggagcccttt
gaatcaaaaatgtttggagagggacatcttaaagagggaaactgtatttttccagaggaa
ctgagtcctaaacgcatggatacagaaatggaggacttagaagaggaccttattgttcta
ccaggaaaatcacatcccaaaaggccaaacccacaaagccacagtacaaagacaggcctt
tcttcatccatattactttatactcctttaaatacggttgcgcctgaggataatgacagg
cctaccgcagacgtgtgttcacctgctttccccatcttaggtactactccagcctttggc
cctcaaggctcctatgaaaaagcatctacagaggtcactggacgaacttgctgcacaccc
cagcttgctcatttgaaagactcagtctgtcttgccagtgacagtaaacaattcgacagt
tcaagcagcccagcaaaaccacataccaccctgcaagtgtcaggcaggcaaggacaacct
acctgtgattgtgactctgtcccgccaggaacacctccacccattgagtcattcactttt
aaagaaaatcagctctgtagaaacacatgccaggagctgcataaacattccgtcgaacag
actgaaacagcagagcttcctgcttctgatagcataaaccgaggcaacctacaattggtt
tcaaagttaaagaatccttcaggttcctgttccgtagatgtgagtgccatgttttgggag
agagccggttgtaaagagccatgtatcataactgcttgtgaagatgtagtttctctttgg
aaagctctggatgcttggcagtgggaaaaacttcatacctggcacttcacagaggttcca
gtattacagatagttccagtccctgatgtgtataatctcgtgtgtgtagctttgggaaat
ttggaaatcagagagatcagggcattgctttgtccctctgatgatgaaagtgaaaagcaa
gtactactgaagtctggaaatataaaagctgtgcttggcctgacaaagaggaggctagtg
agtagcagtgggaccctttctgatcaacaagtagaagtcatgacgtttgcagaagatgga
ggaggcaaagaaaaccagtttttgatgcctcctgaggagactatactaacttttgctgag
gtccaagggatgcaagaagctctgcttggtactactattatgaacaacattgttatttgg
aatttaaaaactggtcaactcctgaaaaagatgcacattgatgattcttaccaagcttca
gtctgtcacaaagcctattctgaaatggggcttctctttattgtcctgagtcatccctgt
gccaaagagagtgagttgttgcgaagccctgtgtttcagctgattgtgattaaccctaag
acgactctcagcgtgggtgtgatgctgtactgtcttcctccagggcaggctggcaggttc
ctggaaggtgacgtgaaagatcactgtgcagcagcaatcttgacttctggaacaattgcc
atttgggacttacttctcggtcagtgtactgccctcctcccacctatctctgaccaacat
tggtcttttgtgaaatggtcaggtacagactctcatttgctggctggacaaaaagatgga
aatatatttgtataccactattcataa
DBGET
integrated database retrieval system
