Symphalangus syndactylus (siamang): 129457629
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Entry
129457629 CDS
T10134
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03018
RNA degradation
ssyn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129457629
09123 Folding, sorting and degradation
03018 RNA degradation
129457629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129457629
03041 Spliceosome [BR:
ssyn03041
]
129457629
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129457629
mRNA degradation factors
5'-3' decay
Lsm complex
129457629
Spliceosome [BR:
ssyn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129457629
Complex C
U2 snRNP components
129457629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
YABBY
Motif
Other DBs
NCBI-GeneID:
129457629
NCBI-ProteinID:
XP_063468964
LinkDB
All DBs
Position
11:complement(95869337..95877968)
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AA seq
151 aa
AA seq
DB search
MRLASTAPSTMIVRPPQPCGTVSQLNLFPFPCPLSGAARGTSTMLFCSFFRSLVGKHVVV
ELKNDLSICGTLHSVHQYLNIKLTNISVTDPEKYPRMLSVKNCFIQGSVVRYMQLPADEV
HKQLLQDAARKEPLQQKQWWLLLLFPRFLFH
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgcttccactgcaccttccaccatgattgtgaggcctccccagccatgtgga
actgtgagtcaattaaacctctttcctttcccctgtcctctttctggggcagcccgcggc
accagcaccatgctcttctgttcttttttcaggtcccttgtgggcaagcatgtggtcgtg
gaactcaagaatgacctgagcatctgtggaaccctccattctgtgcatcagtatctcaac
attaaacttactaatattagtgtcacagaccctgagaaatatcctcgtatgttatcagtg
aagaactgcttcattcagggctcagtggtccgatacatgcagttaccagcagacgaggtc
cacaaacagttgctacaggatgcagcaaggaaggaaccgctgcagcagaaacagtggtgg
ctcctcctcctcttcccccgcttcctctttcattag
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