Symphalangus syndactylus (siamang): 129458339
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Entry
129458339 CDS
T10134
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129458339 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssyn03021
]
129458339 (TAF5L)
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129458339 (TAF5L)
Transcription machinery [BR:
ssyn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129458339 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
129458339 (TAF5L)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129458339 (TAF5L)
STAGA complex
129458339 (TAF5L)
TFTC complex
129458339 (TAF5L)
SAGA complex
129458339 (TAF5L)
SLIK complex
129458339 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
PROPPIN
PEP5_VPS11_N
Beta-prop_IP5PC_F
WD40_like
Ge1_WD40
WD_LRWD1
Nbas_N
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
129458339
NCBI-ProteinID:
XP_055090045
LinkDB
All DBs
Position
12:complement(74136857..74169867)
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNGPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSENNGLEPPDMPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTIRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR
NTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgtaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggactcagatggtcccctgaagcaaggactgcggctgtcacagactgctgaa
gagatggcggccaatctaacagtgcaatcagaatctggttgtgccaacatagtgtctgca
gccccttgccaggcagaaccccagcaatatgaagtacagtttggacgactgcggaatttt
ctcactgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccaaaacggtcccaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaatgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaagaagacagctacaactaccttatccgctacctccaa
agtgacaacaatactgccctgtgcaaagtcctcaccttacatattcatcttgatgtgcag
cctgccaagagaacagactatcagctgtatgccagtggcagctcctcccgcagtgagaac
aacggtttggagccccctgacatgcccagccctattctgcagaatgaggctgccctagag
gtattacaggagagcattaagcgtgtcaaggatgggcctccctccctcactaccatctgc
ttctatgccttctataacacagagcagctgttgaacactgcagaaatctcccccgatagc
aagttgcttgctgctgggtttgacaactcttgtataaaactctggagtttacgatccaag
aagttaaaatcagagccccatcaagtagacgtgtcccgcatccatttggcttgtgatatt
ctggaggaggaggatgatgaggatgataatgcaggcacagagatgaagatactgcgggga
cactgcggaccagtgtacagcacgaggttcctcgcggacagctcagggttgctctcttgt
tctgaagacatgtccatcagatactgggatctggggagtttcaccaacactgtgttgtac
caaggacatgcctatcctgtgtgggatctggacatcagtccatatagcctgtacttcgcc
agtgggtcccacgaccgcaccgccaggctgtggtcatttgatcggacgtacccgctgagg
atatatgcaggacacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttggccacgggctcaaccgacaagaccatccggctgtggagcgctcagcaggggaactcg
gtgaggcttttcacaggccaccgtggccccgtgctttctctcgccttttctcccaacggt
aagtacttggcgtctgctggcgaggaccagcggttgaagctgtgggacttggcctctggg
accctttataaagagctgagaggccacacagacaatatcaccagcctcaccttcagtcca
gacagcggcttgattgcctctgcctccatggacaactcggtgcgcgtctgggacatcagg
aacacttactgcagtgcacctgccgacggctcctccagcgagctcgtgggcgtgtacacc
gggcagatgagcaacgtcctgagcgtgcagttcatggcctgtaaccttcttctggtgact
ggaattacacaagaaaatcaggaacattaa
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integrated database retrieval system
