KEGG   Symphalangus syndactylus (siamang): 129458349
Entry
129458349         CDS       T10134                                 
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn04151  PI3K-Akt signaling pathway
ssyn04510  Focal adhesion
ssyn04512  ECM-receptor interaction
ssyn04518  Integrin signaling
ssyn05020  Prion disease
ssyn05145  Toxoplasmosis
ssyn05146  Amoebiasis
ssyn05165  Human papillomavirus infection
ssyn05200  Pathways in cancer
ssyn05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    129458349 (LAMC1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129458349 (LAMC1)
   04518 Integrin signaling
    129458349 (LAMC1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129458349 (LAMC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    129458349 (LAMC1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    129458349 (LAMC1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    129458349 (LAMC1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    129458349 (LAMC1)
   05145 Toxoplasmosis
    129458349 (LAMC1)
  09164 Neurodegenerative disease
   05020 Prion disease
    129458349 (LAMC1)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN Laminin_B EGF_Teneurin JAG1-like_EGF2 Csa3_N
Other DBs
NCBI-GeneID: 129458349
NCBI-ProteinID: XP_055090065
LinkDB
Position
12:complement(39578836..39703827)
AA seq 1608 aa
MRGSHRAALALRPRGRLWPVLAVLAAAAAGCARAAMDECTDEGGRPQRCMPEFVNAAFNV
TVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFLTDYNNQADTTWWQSQ
TMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGS
CENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQ
EWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECMKNEFD
KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDSELYRST
GHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPG
VMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSIDECNVETGRCVCKDNVEGFNCERCKPGF
FNLESSNPRGCTPCFCFGHSSVCTNAVGYSVYSISSTFQIDEDGWRVEQRDGSEASLEWS
SERQDIAVISDSYFPRYFIAPAKFLGKQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGAG
LRVSVPLIAQGNSYPSETTVKYVFRLHEATDYPWRPALTPFEFQRLLNNLTSIKIRGTYS
ERSAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQFCEMCLSGYRRETPNLGPYSPC
VLCACNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSC
AVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGN
CNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPV
TGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGIT
GQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGHCECREGFVGSRCDQCEENYFY
NRSWPGCQECPACYRLVKDKVADHRVKLQELESLIANLGTGDEMVTDQAFEDRLKEAERE
VMDLLREAQDVKDVDQNLMDRLQRVNNTLSSQISRLQNIRNTIEETGNLAEQARAHVENT
ERLIEIASRELEKTKVAAANVSVTQPESTGDPNNMTLLAEEARKLAERHKQEADDIVRVA
KTANDTSTEAYNLLLRTLAGENETAFEIEELNRKYEQVKNISQDLEKQAARVHEEAKRAG
DKAVEIYASVAQLSPLDSETLENEANNIKMEAENLEHLIDQKLKDYEDLREDMRGKELEV
KNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRDTLQEANDILNNLKDFDRRVNDNK
TAAEEALRKIPAINQTIIEANEKTREAQQALGNAAADATEAKNKAHEAERIASTVRKNAT
STKAEAERTFAEVTDLDNEVNNMLKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAEI
NARKAKNSVTSLLSIINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDL
ENEAKKQEAAIMDYNRDIEEIMKDIRNLEDIRKTLPSGCFNTPSIEKP
NT seq 4827 nt   +upstreamnt  +downstreamnt
atgaggggaagccatcgggccgcgctggccctgcgtccccgggggcggctctggccagtg
ctggccgtgctggcggccgccgcggcgggctgtgcccgggcagccatggacgagtgcacg
gacgagggcgggcggccgcagcgctgcatgcccgaattcgtcaacgccgccttcaacgtg
actgtggtggccaccaacacgtgtgggactccgcccgaggaatactgtgtgcagaccggg
gtgaccggggtcaccaagtcctgtcacctgtgcgacgccgggcagccccacctgcagcac
ggggcagccttcctgaccgactacaacaaccaggccgacaccacctggtggcaaagccag
accatgctggccggggtgcagtaccccagctccatcaacctcacgctgcacctgggaaaa
gcttttgacatcacctatgtgcgtctcaagttccacaccagccgccctgagagctttgcc
atttacaagcgcacacgggaagacgggccctggattccttaccagtactacagtggttcc
tgcgagaacacctactccaaggcaaaccgcggcttcatcaggacaggaggggatgagcag
caggccttgtgtactgatgaattcagtgacatttctcccctcactgggggcaacgtggcc
ttttctaccctggaaggaaggcccagtgcctataactttgacaatagccctgtgctgcag
gaatgggtaactgccactgacatcagagtaactcttaatcgcctgaacacttttggagat
gaagtgtttaacgatcccaaagttctcaagtcctattattatgcgatctctgattttgct
gtgggtggcagatgtaaatgtaatggacacgcaagtgagtgtatgaagaacgaatttgat
aagctggtgtgtaattgcaagcataacacatatggagtagactgtgaaaagtgtcttcct
ttcttcaatgaccggccgtggaggagggcaactgcagaaagtgccagtgaatgcctgccc
tgtgactgcaatggtcgatcccaggagtgctacttcgactctgaactctatcgttccact
ggccatgggggccactgtaccaattgccaggataacacagatggcgcccactgtgagagg
tgccgggagaacttcttccgccttggaaacaatgaagcctgctctccatgccactgtagt
cctgtgggctctctgagcacacagtgcgatagttatggcagatgcagctgtaagccggga
gtgatgggggacaaatgtgaccgttgccagcctggattccattctctcactgaagcagga
tgcaggccatgctcttgtgatccctctggcagcatagatgaatgtaatgttgaaacagga
agatgtgtttgcaaagacaatgtcgaaggcttcaattgtgaaagatgcaaacctggattt
tttaatctggaatcatctaatcctcggggttgcacaccctgcttctgctttgggcattct
tctgtctgtacaaatgctgttggctacagtgtttattctatctcctctacctttcagatt
gatgaggatgggtggcgtgtggaacagagagatggctctgaagcatctctcgagtggtcc
tctgagaggcaagatatcgctgtgatctcagacagctactttcctcggtacttcattgct
cctgcaaagttcttgggcaagcaggtgttgagttatggtcagaacctctccttctccttt
cgagtggacaggcgagatactcgcctctctgcagaagaccttgtgcttgagggagctggc
ttaagagtatctgtacccttgatcgctcaaggcaattcctatccaagtgagaccactgtg
aagtatgtcttcaggctccatgaagcaacagattacccttggaggcctgctcttacccct
tttgaatttcagaggctcctaaacaatttgacctctatcaagatccgtgggacatacagt
gagagaagtgctggatatttggatgatgtcaccctggcaagtgctcgtcctgggcctgga
gtccctgcaacttgggtagagtcctgcacctgtcctgtgggatatggagggcagttttgt
gagatgtgcctctcaggttacagaagagaaactcctaatcttggaccatacagtccatgt
gtgctttgcgcctgcaatggacacagcgagacctgtgatcctgagacaggtgtttgtaac
tgcagagacaatacggctggcccacactgtgagaagtgcagtgatgggtactatggagat
tcaactgcgggcacctcctccgattgccaaccctgtccgtgtcctggaggttcaagttgt
gctgttgtccccaagacaaaggaggtggtgtgcaccaactgtcctactggcaccactggt
aagagatgtgagctctgtgatgatggctactttggagaccccctgggtagaaacggccct
gtgagactttgccgcctgtgccagtgcaatgacaacatcgatcccaacgcagttggaaat
tgcaatcgcttgacaggagaatgcctgaagtgcatctataacactgctggcttctactgt
gaccggtgcaaagacggattttttggaaatcccctggctcccaatccagcagacaaatgc
aaagcctgcaattgcaatccgtatgggacagtgaagcagcagagcagctgtaaccctgtg
acagggcagtgtgaatgtttgcctcacgtgactggccgggactgtggtgcttgtgaccct
ggattctacaatctgcagagtgggcaaggctgtgagaggtgtgactgccatgccttgggc
tccaccaatgggcagtgtgacatccgcactggccagtgtgagtgccagcctggcatcacc
ggtcagcactgtgagcgctgtgaggtcaaccactttgggtttggacctgaaggctgcaaa
ccctgtgactgtcatcccgagggatctctttcacttcagtgcaaagatgatggtcactgt
gaatgcagagaaggctttgtgggaagtcgctgtgaccagtgtgaagaaaactatttctac
aatcggtcttggcctggctgccaggaatgtccagcttgttaccggctggtaaaggataag
gttgctgatcatagagtgaagctccaggaattagagagtctcatagcaaaccttggaact
ggggatgagatggtgacagatcaagcctttgaggatagactaaaggaagcagagagggaa
gttatggacctccttcgtgaggcccaggatgtcaaagatgttgaccagaatttgatggat
cgcttacagagagtgaataacactctgtccagccaaattagccgtttacagaatatccgg
aataccattgaagagactggaaacttggctgaacaagcacgtgcccatgtagagaacaca
gagcggttgattgaaatcgcatccagagaacttgagaaaacaaaagtcgctgctgccaat
gtgtcagtcactcagccagaatctacaggggacccaaacaacatgactcttttggcagaa
gaggctcgaaagcttgctgaacgtcataaacaggaagctgatgacattgttcgagtggca
aagacagccaatgatacgtcaactgaggcatacaacctgcttttgaggacactggcagga
gaaaatgaaacagcatttgagattgaagaacttaataggaagtatgaacaagtgaagaac
atctcacaggatctggaaaaacaagctgcccgagtacatgaggaggccaaaagggccggt
gacaaagctgtggagatctatgccagcgtggctcagctgagccctttggactctgagaca
ctagagaatgaagcaaataacataaagatggaagctgagaatctggaacatctgattgac
cagaaattaaaagattatgaggacctcagagaagatatgagagggaaggaacttgaagtc
aagaaccttctggagaaaggcaagactgaacagcagaccgcagaccaactcctagcccga
gctgatgctgccaaggccctcgctgaagaagctgcaaagaagggacgggataccttacaa
gaagctaatgacattctcaacaacctgaaagattttgataggcgcgtgaacgataacaag
acggccgcagaggaggcgctaaggaagattcctgctatcaaccagaccatcatcgaagcc
aatgaaaagaccagggaagcccagcaggccctgggcaatgctgcggcggatgccacagag
gccaagaacaaggcccatgaagcagagaggatcgcgagcactgtccgaaagaatgccacc
agcactaaggcagaagctgaaaggacttttgcagaagttacagatctggataatgaggtg
aacaatatgttgaagcaactacaagaagcagaaaaagagctaaagagaaaacaagatgac
gctgaccaggacatgatgatggcagggatggcttcacaggctgctcaagaagcagagatc
aatgccagaaaagcgaaaaactctgttactagcctcctcagcattattaatgacctcttg
gagcagctggggcagctggatacagtggacctgaataagctaaacgagattgaaggcacc
ctaaacaaagccaaagatgaaatgaaggtcagcgatcttgataggaaagtgtctgacctg
gagaatgaagccaagaagcaggaggctgccatcatggactataaccgagatatcgaggag
atcatgaaggacattcgcaatctggaggacatcaggaagaccttaccatctggctgcttc
aacaccccgtccattgaaaagccctag

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