Symphalangus syndactylus (siamang): 129458386
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Entry
129458386 CDS
T10134
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
Enzymes [BR:
ssyn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
129458386 (TARBP1)
Transfer RNA biogenesis [BR:
ssyn03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129458386 (TARBP1)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129458386 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129458386
NCBI-ProteinID:
XP_055090125
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Position
12:complement(78849954..78938966)
Genome browser
AA seq
1621 aa
AA seq
DB search
MEWVLAEALLSQSRDPRALLGALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEA
AREVAAGYLVPLLRSLRGRPACGPDPSLQPRHRRRVLRAAGAALRSCVRLAGRPQLAAAL
AEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGAAVALALGGGGDGDE
AGPAEDAAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASPGSGRVEEKLLVLSALAEKL
LPEPGGDRARGVREAGPDARRCWRFWRTVQAGLGQADALTRKRARYLLQRAVEVSAELGA
DCTCGPQEGNGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEY
AVSEENGCWLFHPSWHMCIYKRMFESENKILTKEGVIHFLELYETKILPFSPEFSEFIIG
PLMDALSESSLYSRSPGQPIGSCSPLGLKLQKFLVTYISLLPEEIKSSFLLKFIRKMTSR
HWCAVPILFLSKALANVPRYKALGIDGLLALRDVIHCTMITHQILLRGAAQCYLLHTAMN
LLDVEKVSLSDVSTFLMSLRQEESLGRGTSLWTELCDWLRVNESYFKPSPTCSSIGLHKT
SLNAYVKSLVQEYVKSSAWETGENCFMPDWFEAKLVSLMVLLAVDVEGMKTQYSGKQRTE
NVLRIFLDPLLDVLMKFGTNAYMPLLKTDRCLQLLLKLLNTCRLKGSSVQDDEVSTVLQN
FVMSTTESISEFILRRLTMNELSSVSDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVI
SLLKNASIQHLQEMDSGQEPTLGSQIQRVVSMAALAMVCEAIDQRPELQLDSLHAGPLES
FLSSLQLNQTLQKPHAEEQSSYAHPSECSSVLEESSSSQGWGKIVAQYIHDQWVCLSFLL
KKYHTLIPTTGSEILEPFLPAVQMPIRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLT
SSESLCIESFDMAWKIISSLSNTQLIFWPNLKAFVQFVFDNKVLTIAAKIKGQAYFKIKE
IMYKIIEMSAIKTGVFNTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFR
RDQRLVQDVQTFIENLGHDCAVNIVMENTKREDHYVRICAIKFLCLLDGSNMSHKLFMED
LAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGIIDRIFQAGF
TTNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDIITQN
IPEKKLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTVCKVLSVEEFDALTPVIESSL
HQVESMHGAGNAKKNWQRIQEHFFFATFHPLEDYCLETIFYILPRLSGLIEDEWITIDKF
TRFTDVPLDAGFQWYLSQTQLSKLKPGDWSQQDIGTNLVEADNQAEWTDVQKKIIPWNSR
VPDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCI
SDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEK
SLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLSHGDTK
P
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggtgctcgcggaagcgctgctctcgcagagccgggacccccgggccctgctt
ggggcgctgtgccaaggggaggcatccgcggagcgcgtggagacgctgcgcttccttctg
cagcggctcgaggacgaggaggcgcgcggcagcgggggcgcaggcgcgctcccggaggcg
gcgcgcgaggtggctgcagggtacctcgtgccactgctgcgcagcctgcgcggacgcccc
gcgtgcggcccggaccccagtctgcagcctcgccaccgccggcgcgtgctgagggcggcg
ggcgcggccctgcgctcgtgcgtccgcctggccgggcgtccgcagctggcggccgcgctg
gctgaggaagcgctgcgcgatctgctcgccgggtggcgcgcgcctggcgccgaggctgcc
gtggaggtgctggcagccgtcgggccctgtttgcggccccgcgaggacgggccgctgctg
gagcgcgtggcgggggccgccgtcgccctggcgctgggcgggggcggggacggggatgag
gctgggcctgcagaggacgcggcggcgctggtggccgggcgactgctgccagtgctggtc
caatgcggcggggcggcgctgcgggccgtgtggggcgggctggccgcgcccggggcgtcc
ccggggtccggtcgcgtagaggagaagctgctggtcctgagcgccctggccgagaagctg
ctgcccgagcccggcggcgaccgcgcccgcggcgtgcgcgaggcgggcccggacgcccgg
cgctgctggcgcttctggaggacggtgcaggcggggctgggccaggcggacgccctgacg
cgcaagcgagcgcgctacctgctgcagagggcggtagaggtgtcggcggagctgggggcc
gactgcacctgcgggccccaggaaggaaacggcccaagtctgttttggtggtctgagaag
aaaaaagatgagcttctaaagttttgggaaaattatattttaattatggagactttagaa
ggaaatcagatacatgttataaagccagttttaccaaagctaaacaatctgtttgaatat
gcggtgtcagaggaaaacggatgttggctctttcacccatcctggcatatgtgtatttat
aaaagaatgtttgaaagtgaaaacaaaatcctgaccaaagaaggtgttatccattttttg
gagctgtatgaaacaaagattcttccattttcaccagaattttctgagtttattattgga
ccattaatggatgcactttcagagagctctctgtatagcaggtccccaggccagccgata
ggaagctgttctccattgggactgaaattacagaagtttttagtcacttatatttctctt
cttccagaagaaataaagagtagcttcctattgaagtttattcggaagatgacaagtagg
cattggtgtgctgttcccattttgtttctatctaaggctttggcaaatgtcccaagatat
aaagccctgggtatagatgggcttcttgctctcagggatgttattcattgcactatgatc
acacatcagattctcctgagaggggcagcccaatgctaccttcttcatacagctatgaat
ttgctagatgtggagaaagtgtcactttctgatgtctcaacttttctcatgtctctgaga
caagaggaatccttaggacgaggaacttcattgtggacagagctgtgtgactggctacgt
gttaatgaaagctattttaagccatcccctacgtgtagctccattggacttcacaagaca
tctttaaatgcttatgtgaagagccttgttcaagagtatgttaagtcatctgcttgggaa
acaggagaaaactgctttatgcctgattggtttgaagccaagcttgtttctctgatggtc
ttgctggctgtggatgtggaaggaatgaagactcaatatagcggaaagcagagaacagag
aatgtattgcggatattcttagaccctcttctggatgtgcttatgaagtttggtaccaat
gcctacatgcccttgctgaagactgacagatgcctccagttgctgttgaagctgttgaac
acatgcaggttgaaaggttccagtgtccaagatgatgaggtgtctactgttcttcagaac
tttgtcatgtctactacagagagcatttctgaatttatcctcagaagacttactatgaat
gagctaagtagtgtttcagatctggaccgttgccatttatacctgatggtgttaactgag
cttataaatctgcatttgaaggttgggtggaaaaggggtaaccctatttggagagttatt
tctcttttgaaaaatgcttccattcagcatcttcaagagatggacagtggacaggagcca
acacttggaagtcagattcagagagtagtgagcatggctgccttggccatggtgtgtgag
gccatagaccagaggcctgagctgcagctggactctctccatgctgggcccctggaaagc
ttcctttcctctcttcagctcaatcagacgctgcagaagccccacgcagaggagcagagc
agttatgctcacccctcagagtgcagcagtgttttggaagaatcgtcatcttcccaagga
tggggaaaaattgttgcacaatatattcatgatcaatgggtgtgcctctctttcctgttg
aaaaaatatcacacccttataccaaccacagggagtgaaattctggaaccgtttctacct
gccgttcagatgccaataaggactttgcagtctgcactagaagccctcacagttctttct
tctgatcaagttttaccagtgttccattgcttgaaagtgttggttcccaagcttctgact
tcctctgaatcactctgcatagagtcttttgacatggcttggaaaattatatcttcttta
agcaacacccagctgatattctggcctaatttaaaagcttttgttcagtttgtttttgat
aacaaagttcttaccattgctgccaaaatcaagggccaggcatatttcaaaataaaagag
attatgtacaagataattgaaatgtctgctataaagactggcgtcttcaatacactgata
agttactgctgtcagtcttggatagtgtctgcttcaaatgtgtcccaaggatctttatca
agtgctaaaaattatagcgaacttatccttgaggcttgtatatttggaactgtgtttagg
cgtgatcaaagacttgttcaggatgtacagaccttcatagaaaaccttggacatgactgt
gcggtgaatattgttatggaaaatactaagagagaagaccattatgtgcgaatttgtgct
atcaaattcctgtgtttattagatggctccaatatgtcccataagttgtttatggaggat
cttgcaatcaagctattagataaagatgaattagtatccaagtccaaaaaacgctactat
gtgaattctctacagcacagagtgaaaaaccgagtgtggcagactctgctggtacttttc
cctagacttgatcagaatttcttgaatggaattattgacaggattttccaggctggtttc
accaccaatcaagcatccataaaatattttatagagtggattattatattgattcttcat
aaattccctcaatttcttccaaagttctgggattgtttttcttatggtgaagaaaatctt
aaaacaagcatttgtacatttttagcagttttatcacatttggacattattactcaaaat
attccagaaaagaaactaattctgaagcaagcccttattgttgtgctgcagtggtgtttc
aatcacaattttagtgttcgactgtatgctttagttgctcttaagaaactctggactgtg
tgtaaagtgttaagtgttgaagaatttgatgccctgactcctgtgattgaatccagcctc
catcaagtggaaagcatgcatggggcagggaatgccaagaagaattggcaacgcattcaa
gagcatttcttttttgcaacatttcacccactcgaggattattgtctagagaccatattt
tacatccttccacgcctttcaggccttattgaagatgaatggatcaccattgataaattt
accagattcactgatgttcctttagatgcgggatttcagtggtacctttctcaaactcaa
cttagtaaactaaaaccaggtgattggtctcagcaagacataggtactaatttggtcgaa
gcagataaccaagcggagtggaccgacgttcagaagaagattatcccgtggaacagtcgt
gttcccgacttagacctggagctcctgtttcaggatcgtgctgccagacttggaaagtca
attagtagactcatcgtcgtggcctcactcattgacaaaccgaccaatttaggaggactg
tgcaggacctgtgaggtatttggggcttcagtgcttgttgttggcagccttcagtgtatc
agcgacaaacagtttcagcacctcagtgtctccgcagagcagtggcttccactcgtggag
gtaaaaccacctcagctaattgattatctgcagcagaagaaaacagaaggttataccatc
attggagtggaacaaactgccaaaagtttagacctaacccaatattgctttcctgagaaa
tctctactcttgttgggaaatgaacgtgagggaattccagcaaatctgatccagcagttg
gacgtttgtgtggaaattcctcaacagggcattatccgctccctgaacgtccatgtgagt
ggagccctgctgatctgggagtacaccaggcagcagctgctgtcacacggagataccaag
ccatga
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integrated database retrieval system
