KEGG   Symphalangus syndactylus (siamang): 129458821
Entry
129458821         CDS       T10134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TIR domain-containing adapter molecule 1-like
  KO
K05842  toll-like receptor adapter molecule 1
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn04064  NF-kappa B signaling pathway
ssyn04217  Necroptosis
ssyn04620  Toll-like receptor signaling pathway
ssyn04621  NOD-like receptor signaling pathway
ssyn04936  Alcoholic liver disease
ssyn05133  Pertussis
ssyn05135  Yersinia infection
ssyn05142  Chagas disease
ssyn05160  Hepatitis C
ssyn05161  Hepatitis B
ssyn05164  Influenza A
ssyn05165  Human papillomavirus infection
ssyn05167  Kaposi sarcoma-associated herpesvirus infection
ssyn05168  Herpes simplex virus 1 infection
ssyn05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
ssyn05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    129458821
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    129458821
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    129458821
   04621 NOD-like receptor signaling pathway
    129458821
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    129458821
  09172 Infectious disease: viral
   05161 Hepatitis B
    129458821
   05160 Hepatitis C
    129458821
   05164 Influenza A
    129458821
   05168 Herpes simplex virus 1 infection
    129458821
   05167 Kaposi sarcoma-associated herpesvirus infection
    129458821
   05165 Human papillomavirus infection
    129458821
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    129458821
   05133 Pertussis
    129458821
  09174 Infectious disease: parasitic
   05142 Chagas disease
    129458821
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    129458821
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    129458821
SSDB
Motif
Pfam: TRIF-NTD RHIM TIR_2
Other DBs
NCBI-GeneID: 129458821
NCBI-ProteinID: XP_055091072
LinkDB
Position
12:45180243..45182422
AA seq 710 aa
MACTGPSLPSAFNILGAAGQDTLLYLKHKLKTPRPGCQGQDLLHAMVLLKLGQETEARIS
VVALKADAVARLVARQWAGVDSTEDSEEPPDVSWAVARLYHLLAEEKLCPASLRDVTDQE
ALCSPSSRDDHQLGELQDEAXNRCGWDIVGDPGSIWMLQSNLGCLPPSSASFSGTRSLPC
PIDGVLGWSQGFSLRSMDSPASLASNLEISQSPTMPFLSLHHSPHGPSKLCDDPQASLVP
ELVPGGCREPEEMSWPPSGEIASPPELPSSPPPGLPKVAPDATSTGLPDTPAAPETSTHY
PVECTVGSAGPQSLPSPILKPVKNHCPVKDQTPLQLSVEDTTSPNTKPCPPTSTTPETFP
PPPPPPPSAPCSAHLTPSSPFPSSLESSSEQKFYNFVILHARADEHITLRVREKLEALGV
PDGAIVCKDFQVPGRGELSCLQDAIDHSAFIILLLTSNLDCHLSLHQVNQAMMSNLSDRG
RQTVIPFLSLESSPAQLSSNTASLLSGLVRLDEQSQIFARKVANTFKPHRLQARKAMWRK
EQDTRALRQQSQHLDGERMQAAALNAAYSAYLQSYLSYQAQMEKLQVAFGSHMSFGTGAP
FGAQMPFGGQVSLGVPPPFPTRPGCPQPPPLHAWQAGTPPLPSPQPAAFPQSLPLLQPPA
FPTASPALPQSPGLQPLIIHHAQMVQLGLNNHMWNQRGFQAPEDKTQEAE
NT seq 2135 nt   +upstreamnt  +downstreamnt
atggcctgcacgggcccgtcacttcctagcgccttcaacattctaggtgcagcaggccag
gacacgctcctgtatctgaagcacaaactgaagaccccacgcccaggctgccaggggcag
gacctcctgcatgccatggttctcctgaagctaggccaggaaaccgaggccaggatctcc
gtagtggcattgaaggccgatgcagtggcccggctggtggcccgccagtgggctggcgtg
gacagcactgaggactcagaagagcccccagacgtgtcctgggctgtggcccgcttgtac
cacctgctggctgaggagaagctgtgcccagcctcactgcgggacgtgaccgaccaggaa
gcactctgcagccccagctccagggacgaccaccagctgggggaacttcaggatgaggcc
tgaaaccggtgtgggtgggacattgttggggatccagggagcatctggatgctccagtcc
aatctgggctgcctcccaccatcctcagcttcgttctctgggaccaggagcctcccatgc
cccatcgatggtgttttgggctggagccaagggttctccctgcgatccatggacagcccc
gcatccctggccagcaacttggaaatcagccagtcccccaccatgcccttccttagcctg
caccacagcccacatgggcccagcaagctctgtgacgacccccaggccagcttggtgcct
gagcttgtccccggtggctgccgggagcctgaggagatgagctggccgccatcgggggag
attgccagccccccagagctgccaagcagcccaccccctgggcttcccaaagtagcccca
gatgcaacctcaactggcctccctgacaccccctgcagctccagaaaccagcacccacta
tccggtggagtgcactgtggggtctgcaggaccccagtctctcccctcgcccattttgaa
gcctgtcaaaaaccactgccctgtcaaagaccagacgccactccaactttctgtggaaga
caccacctctccaaataccaagccatgcccacctacttccaccaccccagaaacattccc
tcctcctcctcctcctcctccatcagccccttgttcagctcacctgaccccttcctcccc
gttcccttcctccctggaatcgtcatcggaacagaaattctataactttgtgatcctcca
tgccagggcggacgagcacatcaccctgcgggtccgggagaagctggaggcccttggcgt
gcccgacgggggccatcgtctgcaaggatttccaggtgccagggcgtggggagctgagct
gcctgcaggatgccatagaccactcagctttcatcatcctacttctcacctccaaccttg
actgtcacctgagcctgcaccaggtgaaccaagccatgatgagcaacctcagcgacaggg
gtcgccagactgtcatccccttcctgtccctggagagctccccagcccagctgagctcca
acacggccagcctgctctccgggctggtgcggctggatgaacagtcccagatcttcgcca
ggaaggtggccaacaccttcaagccccacaggcttcaggcccgaaaggccatgtggagga
aggaacaggacacccgagccctgcggcaacagagccaacacctggacggtgagcggatgc
aggcggcggccctgaacgcggcctactcggcctacctccagagctacttgtcctatcagg
cacagatggagaagctccaggtggcttttgggagccacatgtcatttgggactggggcgc
cctttggggctcaaatgccctttgggggccaggtgtctctgggagtcccgccaccctttc
ccactcggccggggtgcccgcagccgccacccctgcatgcgtggcaggctggcacccccc
cactgccctccccacagccagcagccttcccacagtccctgcccctcctgcagcccccag
ccttccctacggcctcacctgcactccctcagagcccaggactgcaacccctcattatcc
accatgcacagatggtacagttgggactgaacaaccacatgtggaaccagagagggttcc
aggcgcccgaggacaagacacaggaggcggaatga

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