Symphalangus syndactylus (siamang): 129459351
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Entry
129459351 CDS
T10134
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
129459351 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
129459351
NCBI-ProteinID:
XP_055091970
LinkDB
All DBs
Position
13:27574507..27635686
Genome browser
AA seq
2168 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGQGSGAPGSLASVRGLQSR
SMSVPEDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LFNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGADKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGAPGPTSGSQGQSQPSAPATK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQESKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
TISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFATESSFDPHHRAQPSYERPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGG
PFNPGSGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGG
GGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSP
TSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPAGGGG
GGSSPSPAPAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRR
STLFLSTDAGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAGYGGY
GAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGA
PQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSL
PASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVR
FLENCQPRAPATSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPS
VDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPAPATPLPPVPPPAVAAA
PPTLDSTASSLTSYDSEVATLTQGASAAPGDPPPPGPPAPAAPAPAAPQPGPDPPPGTDS
GIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGAGAGVAGGPELLDTYVAYLD
GQAFGGSGTPGPPYPPQLMTPSKLRGRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAG
TDGLLALRACSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPG
PLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYIP
ERTSSLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVSPTAAAAPGATSPSA
SSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLF
DIRGSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAK
PLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDR
ALKFFLER
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggccaggtcgaggcccccgggggacc
cggggccagggcagtggggcacctggtagcctggcctctgttagaggcctccagagccgc
tcaatgtccgtcccagaagacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgcctgcgcttcaaccccgatgccaccatctggacggccaag
cagcaggtgctctgtgccctgagcgagagcctgcaggatgtgctcaactatggcctgttc
caaccggccacctcaggccgcgatgccaacttcctggaggaggagaggctgctgcgggag
tacccccagtcctttgagaagggggtcccctacctggagttccgatacaagacccgagtt
tacaaacagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttg
aagaagttcctggagtatgtgcagctcgggacatctgacaaggtggcgcggctgctggac
aaggggctggaccccaattaccatgactcggattcgggagagacccccttgacactggcg
gcccagactgaaggctctgtagaggtgattcgaaccctatgcttgggcggggcccacatc
gacttccgggcccgggatggaatgaccgcactgcataaggccgcgtgtgcccgacactgc
ctggcgctcacggcgctcctggaccttgggggttcccccaactacaaggaccgtcggggg
ctgacccctctgttccacacagctatggtgggtggtgacccccgatgctgtgagctgctc
ctgttcaacagggcccagctgggcatagctgatgagaacggctggcaggaaatccaccag
gcctgccagcggggtcactctcagcatctggagcatctgctcttctatggggctgagccc
ggagcccagaatgcctcggggaacacggctctgcacatctgcgccctctacaacaaggag
acctgtgccaggatcctcctgtaccgaggtgccgacaaggatgtgaagaataacaacggg
cagacccccttccaggtggcagtgattgctgggaattttgagctgggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtacgcggcccggcga
cgggggcccccgggcacagggctgacagtgcccccggcgctgctgcgggccaacagtgac
accagcatggcgctgcccgactggatggtgttctccgccccgggggcctcgtcctctggg
gcccctggccctacctcaggttcccagggccagtcgcagccctcagcccccgccaccaag
ctcagcagcgggaccctccgaagtgccagcagcccccggggtgccagggcccgctctcca
tcccgagggaggcaccctgaggacgccaagaggcagccccgaggccggcccagctccagc
gggacaccccgggaagggccagctgggggcacgggaggctcagggggccccgggggctcc
ctgggcagccgcgggaggcggaggaagctctactcagcggtacccggacgctccttcatg
gctgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggcgagaag
atcaaagtacttagcatcggcgaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggttcccctccgactgcctggaagaagtggcaaatcgctctcaggagagcaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttaatggatgggattggcccagggagcgattacatcattaag
gagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccctaccccggccttcccggcgctgcag
tacctggagtccgtggacgagggtggcgtggcatggcgagctggactgcgaatgggagac
ttcctcatcgaggtgaacgggcagaatgtggtgaaggtcggccaccgacaggtggtgaac
atgatccgccaagggggcaacacgctgatggtgaaggtggtgatggtcaccaggcacccg
gacatggatgaggcagtgcacaagaaagcaccccagcaggccaagcggctgccaccccca
accatctccctgcgttccaaatctatgacctcagagctggaggagatggtctccccctgg
aagaagaagagtgagtacgagcagcagccggcgccggtgcccagcatggagaaaaagcgg
accgtgtatcagatggctctcaacaaactggacgaaatcctggccgcggctcaacagacc
atcagtgcaagcgagagccctgggcccggtggcctcgcgtccctgggcaaacaccgaccc
aaaggtttctttgccactgagtcgagcttcgatccccaccaccgtgcccagccaagttac
gagcgtccttctttcctgcctccaggacctgggctgatgctccggcaaaaatctatcggg
gcggcagaagatgacagaccttacctagcacccccagccatgaaattcagccgcagcctg
tctgtgcctggttcggaggacattcccccgccacccaccacgtccccaccggagcctccc
tacagcacacctccagccccctcctcctcagggcgcctcaccccctccccccgaggaggg
cccttcaaccccggctctggtggccccctccccgcctcctcccctgcatcctttgacggg
ccctcccctcccgacactcgcgtggggagccgcgagaagagcctgtaccacagtgggccc
ctgccccctgcccaccaccacccgccccaccaccaccaccaccatgccccgccccctcag
ccccaccaccaccacgcccacccccctcatcctccggagatggagacgggcggctctccc
gacgaccctccaccccgcctggctctggggccccagcccagcctgcgaggctggaggggc
ggcgggcccagcccgaccccgggggccccgtccccatcgcaccacggcagcgcgggcggg
ggcggcggctcctcccagggcccggctctgcgctatttccagctgccccctcgggcggcc
agcgcagccatgtacgtgcccgcccgctcgggccgcggccgcaagggcccgctggtcaag
cagaccaaggtggaaggcgagccccagaagggcggcggcctcccgcccgcgccgtcgccc
acgtccccggcctccccgcagccgccgcccgcagtggccgcgccctcggagaagaactcc
atccccatccccaccatcatcatcaaggccccgtccaccagtagcagcggccgcagcagc
cagggcagcagcacggaggcggagccccccacccagcccgagcccgcgggaggcggcggc
ggcggctcctcgcccagccccgccccggccatgtcacccgtgcccccgtccccctcgccc
gtgcccacccccgcctcgcccagcggcccggccacgctggacttcacgagccagttcggg
gccgccctggtgggggcggcccggagggaggggggctggcagaatgaggcgcgccggcgc
tccacgctgttcctctccaccgacgcgggggacgaggacggcggggacggcgggctgggc
acaggggcggccccgggcccgcggctgcgccactccaaatccatcgacgagggcatgttc
tccgccgagccctacctccgactggagtctgcgggcagcggcgcgggctacggcggctac
ggggcgggaagccgagcctacgggggtggcgggggcagcagcgccttcaccagcttcctg
cccccgcgacccctggtgcacccgctgaccggcaaggccctggatcccgcctccccgctg
gggctggccctggccgcccgcgagcgagcgctgaaggagtcctcggagggcggcggggcc
ccccagccccctcccaggcccccatcgccccgctacgaggccccgccgcccaccccgcac
caccactcgccccacgcccaccacgagccagtgctgcgtctctggggggcctccccgccg
gaccctgcgcgccgggagctggggtacagggcggggctgggcagccaggagaagtccctt
cccgccagcccgcccgccgcccggcgttccctgctacaccgcctgccgcccaccgctccc
ggggtggggcccctcctgctgcagctggggacggagcccccggccccgcaccccggagtg
agcaagccctggaggtccgcagcccccgaagaacccgagcggctgccgctgcacgtgcgg
ttccttgagaactgccagccccgggcccctgcgaccagcggaagagggcccccctcggag
gacgggccgggggtcccgccgcccagcccacgccggtccgtgcccccctccccgacctcc
ccgagggccagcgaagagaacgggctgcccctgctggtcctgccgcctcccgccccctca
gtggatgtggaagatggcgaattccttttcgtggaaccgctgcctccgcctctggaattc
tccaacagcttcgaaaagccggagtcgcccctcacgcctgggcctccccacccgctgccc
gacccacctgccccggccaccccgttaccccctgtgccacccccggctgtggccgcagcc
cctcccaccctggactccaccgcatccagcctgacatcctatgacagcgaggtggccacc
ctgacccagggggcctccgccgctcctggggacccccctccaccaggcccgcctgcccca
gcagcaccggctcccgctgccccacagcctggcccggaccctccgcctggcacggattct
ggcatcgaggaggtggatagtcggagcagcagtgaccacccactggagaccattagcagc
gcctccacgctgagcagcctatctgccgaaggtggtggcagcgcagggggtgggggcggg
gctggggccggtgtggccggcgggccggagcttctggacacctacgtggcctacctggac
ggccaggcctttgggggcagcggtactcccggcccgccataccctcctcagctcatgact
ccctctaagctccggggccgggcgctaggagccagcggaggcctgcggcctggccccagt
gggggactccgagaccctgtcacccccaccagccccaccgtctcggtgacaggggctgga
accgatgggctgctggccctgcgtgcttgttcaggaccccccacggcaggcgtggctgga
ggtccggtggctgtagagccagaagtcccaccagtgcccttgccgacggcctcctctctg
cctcggaagctgctgccttgggaggagggcccgggcccaccgccaccacctctgcccggg
cccctggcccagcctcaggcctcagccttggccacagtaaaagccagcatcatcagtgaa
ctcagctccaagcttcagcagtttgggggctcctcggcagctggcggcgctctgccctgg
gccagaggaggcagtgggggaagcggagacagccaccacgggggagccagctacatcccg
gagaggacctcctccctgcagcggcagagactctccgacgactcccagtcctcactcctc
tccaagcctgtcagcagcctgtttcagaactggcccaaaccacctctgccgccgctcccc
accggaacaggggtctcccctacagccgctgcggccccaggggccacctcaccctcagcc
tcctcctcctccacgtccacccgccacctccagggcgtggagttcgagatgcggccccct
ctgctccgccgggcccccagcccctcgctgctgcctgcctcggagcacaaggtcagccct
gcgcccaggccctcgtccctgcccatcctgccttccggaccgctctacccaggcctcttt
gacatccgtggctccccaactggaggggcaggaggctcggctgaccccttcgccccagtc
tttgtgccaccacacccggggatatccggggggctcgggggagccttgtcaggggcctcg
cgctccctctcaccgacccgcctgctctcgctgcccccggacaagccgtttggcgctaaa
cctctggggttctggaccaagttcgacgtggctgattggctggagtggctgggtttggcg
gagcaccgagcccagttcctggaccacgagatcgatggctcccacctacccgccttgacc
aaggaggactacgtagatctaggtgtgaccagggtgggccaccgcatgaacatcgaccgg
gctctcaagttcttcctggagaggtga
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