Symphalangus syndactylus (siamang): 129459857
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Entry
129459857 CDS
T10134
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129459857 (TDRD12)
Enzymes [BR:
ssyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
129459857 (TDRD12)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129459857 (TDRD12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
129459857
NCBI-ProteinID:
XP_055093068
LinkDB
All DBs
Position
13:56308840..56417167
Genome browser
AA seq
1400 aa
AA seq
DB search
MERIASGRPWGPRALLGTRSVGHLLRGAEALKVEGRNALAAGTWRGRPASPATVGDFQGE
GAHLPSGARRMLQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLSSAMNDFYNSTCQDI
EIKPLTLEEGQVCVVYCEELKCWCRAIVKSIMSSADQYLAECFLVDFAKNIPVKSKNIRV
VVESFMQLPYRAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDSAAIQYFQNLLKATTQV
EARLCAVEEDTFEVYLYVTIKDEKVCVNDDLVAKNYACYMSPTKNKNDYLEKPRLNIKSA
PSFNKLNPALTLWPMFLQGKDVQGMEDSHGLNFPAQSLQHTWCKGIVGDLRPTATAPDKA
VKCNMDSLRDSPKNKSEKKHHCISLKDTNKRVESSAYWPRKRGITIYADPHVPEASALSQ
KPNEKPLRLAEKKEYDEKNSCVKLLQFLNPDPLRADGISDLQQLQKLKGLQPPMAVLRNK
IEPCLTIDSSPLSEDLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCESNPLLYLL
PVLTILQTGACYKSLPSRNGPLAVIVCPGWKKAQFIFELLGEYSMSSRPLHPVLLTIGLH
KEEAKNTKLPRGCEVIVTTPYSLLRLLACQSLLFLRLCHLILDEVEVLFLEANEQMFAIL
DNFKKNIEVEERESAPHQIVAVGVHWNKHIEHLIKEFMNDPYIVITATEEAALYGNVQQV
VHLCLECEKTSTLLQALDFIPSQAQKTLIFTCSVAETEIVCKVVESSSIFCLKMHKEMIF
NLQKVLEQWKKKLSSGSQIILALTDDCVPLLAITDATCVIHFSFPASPKVFGGRLYCMSD
HFHAKQGSPAEQGDKKAKSVLLLTEKEASHAVGVLRYLERADAKVPAELYKFTAGVLEAK
EDKKAGRLLCPYLKAFGFCKDKRICPDRHRINPETDMPRKLSSQAVPSFGYIKIIPFYIL
NATNYFGRIIDKHMDLYATLNAEMNEYFKDSNKTTVEKVEKFGLYGLAEKTLFHRVQVLE
VSQKEDAWALDDILVEFIDEGRTGLVTRDQLLHLPEHFHVLPPQAVEFIVCRVKPADNEM
EWNPKVTRYIHHKIVGKLHDAKVILALGNTVWIDPMVHITNLSNLKTSVIDYNVRAEILS
MGMGIDNPEHIEQLKKLREDAKIPAFEESLSQTPPRVTGTRPAQDQEHPSEEQEGQGTPP
PAEDAACLQSPQPEDTGAERGAESKTSSENQKPETLPGNTEGASISRTAQLPLKSFHPQI
KWFQKEDVVILKIRIRNVKDYKCQYLRDRVIFSAWAGDKFYLADLELRGNIRKDDCKCVI
RNDEPVITLAKERREAWFHLLRQRNPNVAFDFDHWEDCEEDSHFPKVVNSKNLPYTVTEV
VEDSSSTSEDDDSESECKGE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcatcgcctcgggccgaccctggggtccgcgagcgctcctggggacgaggagt
gtggggcacctgctgcggggggccgaggcgctaaaggtggagggaaggaacgcactcgcg
gcagggacctggcggggacggccagcctcgcccgcgacggtaggggacttccagggcgag
ggggcccatctgccctcgggcgccaggaggatgctccagctcctggtgctgaagattgaa
gatccaggttgcttctgggttattataaaagggtgtagtccctttttagatcatgatgtc
gactatcaaaaattaagtagtgccatgaatgacttctacaacagcacatgtcaagatata
gaaataaaaccattaacactggaagaaggacaggtgtgtgtggtctattgtgaggagcta
aagtgctggtgcagagccattgtcaaatcaattatgtcttccgcagaccagtacttggca
gaatgtttccttgtggactttgccaagaacattccagtcaaatctaaaaacatccgagtt
gtagtagaatcatttatgcagcttccctatagagcaaaaaaattcagcctgtactgcaca
aagcctgtcacattacacattgacttctgccgagacagtactgacattgtacctgccaag
aagtgggacagtgcagctattcagtactttcagaaccttctgaaagcaactacccaggtg
gaagccagattatgtgctgtggaagaagatacatttgaggtttacctttatgtaactata
aaagatgaaaaagtttgtgttaatgatgatcttgttgcaaagaactatgcttgttatatg
tcacctacaaagaataaaaacgattatttagaaaaaccaagattgaatataaaatcagca
ccctccttcaataagctcaatccagcccttacactctggccaatgtttttgcaaggaaaa
gatgttcaaggaatggaagattcacatggtttaaattttccggcacaatctctgcagcat
acatggtgcaagggtattgtcggtgacctcaggccaacagccacagcaccggacaaagct
gtaaaatgtaatatggattcattgagagattcacctaaaaacaaatctgaaaagaaacac
cattgcatctctttaaaagatacaaataagcgtgttgaatcttcagcgtactggccaaga
aaaagaggcataaccatatatgctgatccacatgtaccagaagcaagtgctttaagtcag
aagccaaatgagaaacctcttagattggctgagaagaaagaatatgatgagaagaatagc
tgtgtgaaattactgcagtttttaaatcctgatcctttgagagctgacggaatctctgat
ctccagcagttgcagaagctgaagggcctgcagccgcccatggcagtgctccggaacaag
atcgagccctgcttaaccattgactcgtcgccgctgtcagaagacctgaagaaggctctt
caaagaaataagtttccaggccccagccacactgaatcttactcttggcctcccatagca
cgtggctgtgatgtggttgtcatttctcactgtgaaagcaaccctttgctctacctccta
ccagtgttgacaattttgcaaacaggagcctgctacaagtcattaccaagtagaaatgga
cctctcgcagtcattgtgtgccctgggtggaagaaggcccaatttatttttgaattattg
ggagaatatagcatgtcctccaggcctcttcatcctgtgctattaacaattgggctccat
aaagaggaagccaaaaatacaaagcttccaaggggctgtgaagtgattgttacgacccca
tacagcctgctgaggcttctcgcctgtcagagcctactgttcctcaggctctgccacctg
atcctggatgaggtagaggtgctattcttggaagccaatgaacagatgtttgctatatta
gataactttaaaaaaaatattgaagttgaagaaagggaatctgcaccacatcagattgtt
gccgttggagttcattggaacaaacatatagaacatcttatcaaagagttcatgaatgat
ccctacattgtgatcacagccacggaagaggctgctctctatggcaatgtccaacaggta
gtacatctttgcctagaatgtgaaaaaacttctactttactccaagctcttgattttatt
ccaagtcaggcacaaaagaccttgatcttcacctgctctgtagctgaaacagaaatagtg
tgtaaggtagtagaaagcagttcaatattttgcttgaagatgcataaagaaatgattttt
aacttacaaaaggttttagaacagtggaagaagaagttaagttctggctctcagatcata
ttagccctcacggacgactgtgtcccactcttggccatcactgatgccacgtgtgtgatt
cacttcagcttccctgcctcgccaaaagtttttggtggacgcctgtattgcatgtctgat
cattttcacgctaaacagggctctcctgcagaacagggagataagaaagccaaatctgtc
ttgctgctgacggagaaagaagcgagccacgcagtgggcgtcctgcgctacttggagcga
gcggatgccaaggtccctgcagagctgtacaagttcaccgcaggagttctggaagccaaa
gaagataagaaagccggaaggcttctttgtccttatctgaaggctttcggtttttgcaaa
gacaaaaggatctgtcctgaccgacaccgtattaatccagaaacggacatgcccaggaaa
ctgtccagccaagccgtaccttcatttggatacattaaaataatacctttttatattttg
aatgcaacaaattactttggccgtataattgataaacacatggatctttatgcaactctc
aatgctgaaatgaatgaatattttaaggattctaataaaacaactgtggaaaaggtggag
aagtttggattgtatggattagcagaaaaaacgctttttcacagagttcaggtgttggaa
gtgagccaaaaagaagacgcctgggccctggatgacatccttgtagagttcatcgacgaa
ggcaggacagggctcgtcacaagggaccagctgctgcatctcccagaacatttccacgtg
cttcctccgcaggctgtggagtttattgtctgtagggtgaaacctgctgacaacgaaatg
gaatggaatccgaaggttactaggtacattcatcataaaattgttggaaaattgcatgat
gcaaaagtgatcctggctttgggaaatacagtttggattgatccaatggtgcacattaca
aacctttccaatttaaaaacctctgtcattgattataatgttcgagctgaaattttatcc
atgggcatgggcattgataatccagaacacatagaacaactgaaaaaattacgcgaagat
gctaagataccagcttttgaagaaagcctaagccagaccccgccgagggtgacagggacc
aggcctgctcaagaccaggaacatccatccgaggagcaggaggggcaggggacgcctcct
ccagcagaagatgctgcttgcctgcagagcccccagcctgaggacacgggtgcagaaaga
ggggctgagtccaagacgagctcagaaaaccagaagcctgaaactttacctggaaacact
gaaggtgcctccattagcagaactgcacagctgcctctgaaaagcttccacccacaaata
aaatggttccaaaaagaagatgtcgtcatcttaaagataagaataaggaatgtaaaggac
tacaagtgtcagtatttaagggatagagtcattttcagtgcttgggcgggagacaaattt
tacctggctgatctggagctgcggggcaacataaggaaagatgattgcaaatgtgtgatt
agaaacgatgaacctgttatcactctggccaaagagagaagggaggcatggtttcaccta
ctcagacaaaggaaccccaacgtggcttttgattttgatcactgggaagactgtgaagag
gacagccacttccccaaggtagtgaattctaaaaacctgccgtacacagtgacagaggtg
gttgaagacagtagcagcacttcagaggatgacgacagtgagagtgaatgcaaaggtgaa
tga
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