Symphalangus syndactylus (siamang): 129460325
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Entry
129460325 CDS
T10134
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssyn03009
]
129460325 (DDX55)
Enzymes [BR:
ssyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129460325 (DDX55)
Ribosome biogenesis [BR:
ssyn03009
]
Eukaryotic type
Pre-60S particles
Helicases
129460325 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
AAA_22
SBF_like
Motif
Other DBs
NCBI-GeneID:
129460325
NCBI-ProteinID:
XP_055093964
LinkDB
All DBs
Position
13:119388911..119408881
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AA seq
598 aa
AA seq
DB search
MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGG
RNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPS
RLENYYMVCKADEKFNQLVHFLRSRKQEKHLVFFSTCACVEYYGKALEALVKGVKIMCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRNTADLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVN
TDTIPFKDKIREKQRQKLLEQQREKTENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKRE
EGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTGKRTIKTADLGISDLEDD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgtgacggagggctcctgggagtcgctgccagtgccgctgcacccgcaggtg
ctgggcgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtccgcaaccatc
cctctgttcatgcgaaacaaagatgtcgctgcagaagcggtcacaggtagtggcaaaaca
ctcgcttttgtcatccccatcctggaaattcttctgagaagagaagagaagttaaaaaag
agtcaggttggggccataatcatcacccccactcgagagctggccattcaaatagacgag
gtcctgtcgcatttcacgaagcacttccctgagttcagtcagattctttggatcggaggc
aggaatcctggagaagatgttgagaggtttaagcaacaaggtgggaacatcattgtggcc
actccaggccgcttggaggacatgttccggaggaaggcggaaggcttggatctggccagc
tgtgtgcgatccctggatgtcctggtgttggatgaggcagacagacttctggacatgggg
tttgaggcaagcatcaacaccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctctgccactcagacgcaggaagtggagaacctggtgagagcgggcctccggaaccct
gtccgggtctcagtgaaggagaagggcgtggcagccagcagtgcccagaagaccccctcc
cgcctggaaaactactacatggtatgcaaggcagatgagaaatttaatcagctggtccat
tttcttcgcagtcgtaagcaggagaaacatctggtcttcttcagcacctgtgcctgtgtg
gaatactatgggaaggctctggaggcgctggtgaagggcgtgaagattatgtgcattcat
ggaaagatgaaatataaacgcaataagatcttcatggagttccgcaaattgcaaagtggg
attttagtgtgcactgatgtgatggcccggggaattgatattcctgaagtcaactgggtt
ttgcagtatgaccctcccagcaatgcaagtgccttcgtgcatcgctgcggtcgcacagcc
cgcattggccacgggggcagcgctctggtgttcctcctgcccatggaagagtcatacatc
aatttccttgcaattaaccaaaaatgccccctgcaggagatgaagctccagagaaacaca
gcggaccttctgccaaaactcaagtccatggcactggccgacagagctgtgtttgaaaag
ggcatgaaagcttttgtgtcatatgtccaggcttatgcaaagcatgaatgcaacctgatt
ttcagattaaaggatcttgattttgccagccttgctcgaggttttgccctgctgaggatg
cccaagatgccagaattgagaggaaagcagtttccagattttgtgcccgtggacgttaat
accgacacgattccatttaaagataaaatcagagaaaagcagaggcagaaactcctggag
caacaaagagagaaaacagaaaatgaagggagaagaaaattcataaaaaataaagcttgg
tcgaagcagaaggccaaaaaagaaaagaagaaaaaaatgaatgagaaaaggaaaagggaa
gagggttctgatattgaagatgaggacatggaagaacttcttaatgacacaagactcttg
aaaaaacttaagaaaggcaaaataactgaagaagaatttgagaagggcttgttgacaact
ggcaaaagaacaatcaagacagcagatttagggatctcagatttggaagatgactga
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