Symphalangus syndactylus (siamang): 129460375
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Entry
129460375 CDS
T10134
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
129460375 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
129460375 (LHX5)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
129460375 (LHX5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129460375
NCBI-ProteinID:
XP_055094098
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All DBs
Position
13:complement(109137766..109147801)
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AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPTLAGPHATDNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggttgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgtgttcagtgctgcgagtgcaaaaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgactttttcaggcgcttt
ggcaccaaatgcgccggctgcgcgcaaggcatctcgcccagcgacctggtgcgcaaggcc
cggagcaaagtctttcacctcaactgtttcacctgcatggtgtgtaacaagcagctgtcc
accggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaagatgactacctg
agctcatccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccagacctccaggacgcactgcaggacgaccccaaagagacggacaactcgacc
tcgtcggacaaggagaccgccaacaacgagaatgaggagcagaactcgggcaccaagcgg
cgcggcccccgcaccaccatcaaggccaagcagctggagacgctcaaggctgccttcgcc
gccacgcccaagcccacgcgccacatccgcgagcagctggcgcaggagaccggcctcaac
atgcgcgtcatccaggtgtggtttcagaaccgacggtccaaagaacgccggatgaaacag
ctgagcgccctgggcgcccggaggcacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttgggatccaccccgtacacctactacgga
gactaccaaggcgactactacgcgccgggaagcaactacgacttcttcgcgcacggcccg
ccttcgcaggctcagtccccggccgactccagcttcctggcggcctctggccccggctcg
acgccgctgggcgcgctggagccgacgctcgccggcccgcacgccacagacaaccccagg
ttcaccgacatgatctctcacccggacacaccgagcccagagccgggcctgccgggcgcg
ctgcaccccatgcccggcgaggtgttcagcggcgggcccagcccgcccttcccaatgagc
ggcaccagcggctacagcggacccctgtcgcatcccaaccccgagctcaacgaggccgct
gtgtggtaa
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