Symphalangus syndactylus (siamang): 129460764
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Entry
129460764 CDS
T10134
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssyn01001
]
129460764 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129460764 (TRIM28)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129460764 (TRIM28)
Protein kinases [BR:
ssyn01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
129460764 (TRIM28)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129460764 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-B_box_Trim66
PHD_2
zf-RING_2
PHD-1st_NSD
Prok-RING_1
YqxI
YaaC
Motif
Other DBs
NCBI-GeneID:
129460764
NCBI-ProteinID:
XP_055095046
LinkDB
All DBs
Position
13:complement(20053331..20059944)
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AA seq
835 aa
AA seq
DB search
MAASAAAASAAAASAASGSPGPGEGSAGGEKRSTASSAAASASASAAASSPAGGGAEALE
LLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAANNSGDGGAAGDGAVVDCPVC
KQQCFSKDIVENYFMRDSGSKAATDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEA
HQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDH
QYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAIL
QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTA
LLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGP
APMAPPRAPGPLSKQGSSSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVKRSRSGEGEVSG
LMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAATGQPGTAPAG
TPGAPPLAGMAMVKEEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPRLASPSGSTS
SGLEVVAPEGTSAPGGGPGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVP
GEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPANQRKCERVLLALFCHEPCRPL
HQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKA
DVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPMSLPGAGLSSQELSGGPGDGP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcagcctcggcagcagcggcctcggccgcctctggcagcccg
ggcccgggcgaaggctccgctggcggcgaaaagcgctccaccgcctcttcggccgcagcc
tcggcctctgcctcagccgcggcgtcgtcgccggcggggggcggcgccgaggcgctggag
ctgctggagcactgcggcgtgtgcagagagcgcctgcgacccgagagggagccccgcctg
ctgccctgtttgcactcggcctgtagtgcctgcttagggcctgcggcgcccgccgccgcc
aacaactcgggggacggcggggcggcgggcgacggcgccgtggtggactgtcccgtgtgc
aagcaacagtgcttctccaaagacatcgtggagaattatttcatgcgtgatagtggcagc
aaggctgccaccgacgcccaggatgcgaaccagtgctgcactagctgtgaggataatgcc
ccagccaccagctactgtgtggagtgctcggagcctctgtgtgagacctgtgtagaggcg
caccagcgggtgaagtacaccaaggaccacactgtgcgctctactgggccagccaagtct
cgggatggtgaacgtaccgtctattgcaacgtacacaagcatgaaccccttgtgctgttt
tgtgagagctgtgatactctcacctgccgagactgccagctcaatgcccacaaggaccac
cagtaccagttcttagaggatgcagtgaggaaccagcgcaagctcctggcctcactggtg
aagcgccttggggacaaacatgcaacattgcagaagagcaccaaggaggttcgcagctcg
atccgccaggtgtctgacgtacagaagcgtgtgcaagtggatgtcaagatggccatcctg
cagatcatgaaggagttgaataagcggggccgtgtgctggtcaacgatgcccagaaggtg
actgaggggcagcaggagcgcctggagcggcagcactggaccatgaccaagatccagaag
caccaggagcacattctgcgctttgcctcttgggctctggagagtgacaacaacacagcc
cttctgctttctaagaagttgatctacttccagctgcaccgggccctcaagatgattgtg
gatcccgtggagccacatggagagatgaagtttcagtgggacctcaatgcctggaccaag
agtgccgaggccttcggcaaaattgtggcagagcgtcctggcactaactcaacaggccct
gcacccatggcccctccaagagccccagggcccttgagcaagcagggctctagcagtagc
cagcccatggaggtgcaggaaggctatggctttgggtcaggagatgatccctactcaagt
gcagagccccatgtgtcaggtgtgaaacggtcccgctcaggtgagggtgaggtgagcggc
cttatgcgcaaggtgccacgagtgagccttgaacgcctggacctggaccttacggctgac
agccagccacccgtcttcaaggtcttcccaggcagtaccactgaggactacaaccttatt
gttattgaacgtggcgctgcggctgcagctaccggccagccagggactgcacctgcagga
acccctggtgccccacccctggctggcatggccatggtcaaggaggaggagacggaggct
gccattggagcccctcctactgccactgagggccctgagaccaaacctgtgcttatggct
cttgcggagggtcctggtgctgagggtccccgcctggcctcacctagtggcagcaccagc
tcagggctggaggtggtggctcctgagggtacctcagccccaggtggtggcccgggaacc
ctggatgacagtgccaccatttgccgtgtctgccagaagccaggcgatctggtcatgtgc
aaccagtgtgagttttgtttccacctggactgtcacctgccggccctgcaggatgtacca
ggggaggagtggagctgctcactctgccatgtgctccctgacctgaaggaggaggatggc
agcctcagcctggatggtgcagacagcactggtgtggtggccaagctttcaccagccaac
cagcggaaatgtgagcgtgtactgctggccctattctgtcatgaaccctgccgccccctg
catcagctggctaccgactccaccttctctctggaccagcccggtggcaccttggatctg
accctgatccgtgcccgcctccaggagaagttgtcacctccctacagctccccacaggag
tttgcccaggatgtgggccgcatgttcaagcaattcaacaagttaactgaggacaaggca
gacgtgcagtccatcatcggcctgcagcgcttcttcgagacgcgcatgaatgaggccttc
ggtgacaccaagttctctgctgtgctggtggagcccccgccgatgagcctgcctggtgct
ggcctgagttcccaggagctgtctggcggccctggtgatggcccctga
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