Symphalangus syndactylus (siamang): 129460954
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Entry
129460954 CDS
T10134
Symbol
CHFR
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129460954 (CHFR)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129460954 (CHFR)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129460954 (CHFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
FHA
zf-C3HC4_2
zf-RING_2
zf-C3HC4
Yop-YscD_cpl
zf-CCHH
zf-rbx1
zf-RING_6
Glyco_hydro_92
LAX
Motif
Other DBs
NCBI-GeneID:
129460954
NCBI-ProteinID:
XP_055095554
LinkDB
All DBs
Position
13:complement(128394323..128438813)
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AA seq
664 aa
AA seq
DB search
MERPEEGKQSPPPQPWGRLLRLGAEEDEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
CRIIVDEKSGQVTLEDTSTNGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
ESLNEKQGMTQESFEANKENVFHGTKDTSGAGAGRGANPWVPPSSPATQVCFEEPQPSTS
TSDLFPTASASSTEPPPAGRERSSSCGSGGGSISPKGSGPSVASDEVSSFASALPDRKTA
SFSSLEPQDQEDLEPVKKKMRGDGDLDLNRQLLVAQPRRNAQTVHEDVTAAAGKPDKMEE
TLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVE
AYLIQHPDKSRSEEDVKSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSD
ISQPYVVCRQCPEYRRQVVQPPHCPAPEGEPRAPQALGDAPSTSVSLTTAVQDYVCPLQG
SHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCPRTGCFGCLAPFCELN
LGDKCLDGVLNNNSYESDILKNYLATRGLTWKSVLTESLVALQRGVFLLSDYRVTGDTVL
CYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQT
RFKN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcccgaggaaggcaagcagtcgccgccgccgcagccctggggacggctcctg
cgtctgggcgcggaggaggacgagccgcacgtcctcctgaggaagcgggagtggaccatc
gggcggagacgaggttgcgacctttcgttccccagcaataaactggtctctggagatcac
tgtagaattatagtggatgaaaaatcaggtcaggtgacactggaagataccagcaccaat
ggaacagtgattaacaagctgaaagttgttaagaagcagacatgccctttacagactggg
gatgtcatctacttggtgtacaggaagaatgaaccggaacacaacgtggcatacctctat
gaatctttaaatgaaaagcaaggcatgacacaagaatcctttgaagctaacaaggaaaat
gtgttccatggaaccaaagatacctcaggtgcaggtgcagggcgaggggccaatccctgg
gtccctccgtcgtcgcccgccactcaggtgtgctttgaggaaccacagccatcaacgtcg
acgtcagacctcttccccacagcctcggcctcttccacggagcctcctcctgcagggcga
gagcgttcctccagttgtgggtctgggggtggtagcatctcccctaaaggaagtggtccc
tctgtggcaagtgatgaagtctccagctttgcctcagctctcccagacagaaagactgcg
tccttttcgtcgttggaaccccaggatcaggaggatttggagcccgtgaagaagaaaatg
agaggagatggggaccttgacctgaacaggcagttgttggtcgcacaaccgcgtagaaat
gcccaaactgtccacgaggacgtcacagctgcagctgggaagccagacaagatggaggag
acgttgacatgcatcatctgccaggacctgctgcacgactgcgtgagtttgcagccctgc
atgcacacgttctgcgcagcttgctactcgggctggatggagcgctcgtccctgtgtccc
acctgccgctgtcctgtggagcggatctgtaaaaaccacatcctcaacaacctcgtggaa
gcatacctcatccagcacccagacaagagtcgcagtgaagaagatgtgaaaagtatggat
gccaggaataaaatcactcaagacatgctgcagcccaaagtcaggcggtctttttctgat
gaagaagggagttcagaggacctgctggagctgtcagacgttgacagtgaatcctcagac
attagccagccatacgttgtgtgccggcagtgtcctgagtacagaaggcaggtggtgcag
cctccccactgcccagcacccgagggcgagccaagagccccacaggccctgggggatgca
ccctccacgtccgtcagcctgacgacagcagtccaggattacgtgtgccctctgcaagga
agccacgccctgtgcacctgctgcttccagcccatgcctgaccggagagcggagcgcgag
caggacccgcgtgtcgcccctcagcagtgtgcggtctgcctgcagcctttctgccacctg
tactggggctgcccccggaccggctgcttcggctgcctggccccgttctgtgagctcaac
ctgggtgacaagtgtctggacggtgtgctgaacaacaacagctacgagtcagacatcctg
aagaattacctggcaaccagagggttgacatggaaaagcgtgttgaccgagagcctcgtg
gctctccagcggggagtgtttctgctgtctgattacagagtcacgggagacaccgtgctg
tgttactgctgtggcctgcgcagcttccgcgagctgacctatcagtatcggcagaacatt
cctgcttccgagttgccagtggccgtaacatcccgtcctgactgctactggggccgtaac
tgccgcactcaggtgaaagctcaccacgccatgaaattcaatcatatctgtgaacagaca
aggtttaaaaactaa
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