Symphalangus syndactylus (siamang): 129461615
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Entry
129461615 CDS
T10134
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129461615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssyn03021
]
129461615
Enzymes [BR:
ssyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129461615
Transcription machinery [BR:
ssyn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129461615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
129461615
NCBI-ProteinID:
XP_055096766
LinkDB
All DBs
Position
14:51453174..51537749
Genome browser
AA seq
1720 aa
AA seq
DB search
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENADPSASEIQEELEQYTTEIVQNNLLGSQGAH
VKNVCESKSKLIGLFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS
EPLGIEEAQTGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDDMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIQKLLALMAQEQKLPEEVAAPTT
DEEKDSLIAIDQSFLSILPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPAMGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREQYMELVYRG
LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKET
PRSIPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPRAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALRHFRAIKKWQSKHP
NTLLRRGAFLSYSQKIQEAVKALNLESENRNGRSLGTQEMLRMWYELDEESRRKYQKKAA
TCPDPSLSVWRPDIYFASVSETFETKVDDYGQEWAAQTEKSYEKSELSLDRLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKKVKSLKKQLTRVCLGEVLQKIDVQESFCMEEQQNKFRVYQLRFQ
FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRSVNTRRATQRDLDNA
GESRRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN
DDEDMQEERNPHREGARKTREQDEEVGSGAEEDPSLPSLLTQPRKPTHSQEPQGPEAMER
RVQAVREIHSFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT
RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATLLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctccaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagtgttaaatccattacgaaccctcggtacctggac
agcctggggaacccatcggcaaacggcctgtacgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgttctgggcacctgggccac
attgagctcccactcacggtgtataaccctctcctcttcgataagctgtacctgctgctt
cggggctcttgtttaaactgccacatgctgacttgtccccgggccgtgattcacctctta
ctctgccagctgagggttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctggaagaaaacgcggatccctctgcctctgaaattcaggaggaa
ttagaacaatacacaactgaaattgtgcagaacaatctcctggggtcccagggcgcacat
gtaaagaacgtgtgtgagagcaagagcaagctcattggtctcttctggaaggcacatatg
aatgctaagcgctgtccccactgcaagaccgggcgatccgttgtccgaaaggaacacaac
agcaagttgactatcacgtttccagccatggtgcacaggacagctggccagaaggactcg
gaacccctgggaattgaggaagctcagacgggaaaacgaggatacttaacacccaccagt
gcccgcgaacacctttctgccctgtggaagaatgaaggattctttctgaactaccttttt
tcgggaatggatgatgatgatatggagtccagattcaatcccagtgtgttctttctagat
ttcttggtggtgccgccctccaggtatcgcccagtcagtcgcctaggagaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggatgtagttctgattcaaaaa
cttctggcattgatggcccaagaacagaagctgccagaggaagtggccgcacccactaca
gatgaggaaaaagactctttgattgctattgaccaatcctttttgagtatacttccaggc
cagtccctcatagacaaactttacaacatttggattcgcctccagagccatgtcaatatt
gtgtttgatagcgagatggacaaactaatgatggacaagtacccaggcattaggcagatc
ctggagaagaaagaaggcctgttccgaaaacacatgatgggaaagcgagtggactacgct
gcgcgctcagtcatctgcccagacatgtacatcaacaccaacgaaattggaattcccatg
gtgtttgccacaaaactgacctacccgcagccagttaccccgtggaatgttcaggaactt
aggcaagcagtcatcaacggccccaatgtgcacccaggagcctccatggtcatcaatgag
gacggcagccgcacagccctgagcgctgtggacatgactcagcgagaggccgtggccaag
cagctcctgaccccagccatgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacattctgctactgaaccgacagcccaccctgcacagaccctcc
atccaggcccaccgtgcccgcatcctgcctgaagagaaagtgctgcggctccactatgcc
aactgcaaggcctataatgccgactttgatggagacgagatgaatgcccatttcccccag
agtgagctgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccaaccattggcgggactgatccaggatcacatggtttcaggggcaagc
atgactactcggggttgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacggacaaagtggggcgcgtgaagctcctttctccttccatcctgaagccctttccg
ctgtggacaggaaaacaggttgtgtcaacgctgctcataaatataatcccagaggaccac
atcccactgaatttatctggaaaggcaaaaatcaccgggaaagcctgggtgaaggaaact
cctcgatccattcctggctttaaccctgactcaatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggagtgctggacaaggcgcactacgggagctctgcctacggc
ctggtccactgctgctatgagatctatggaggcgagaccagcggcaaggttctaacctgc
ctggcccgcctcttcactgcctacctgcagctctacagaggcttcacgttgggcgtggaa
gacattttggtgaagccaaaggcagatgtcaagaggcaacgtatcattgaagaatccacc
cactgcgggccccgggctgtcagggctgcattaaacctgccagaagccgcatcatatgat
gaggtccgaggaaaatggcaggatgcccatctgggcaaggaccagagggattttaacatg
attgatctgaagttcaaagaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccttttggcctacacagacagttcccagagaacagcctgcagatgatggtgcagtca
ggagccaaaggttcaaccgtgaacacgatgcagatctcgtgcctgctgggccagattgaa
ttggaaggtcggagacccccactgatggcgtctggcaagtcactgccctgctttgagcct
tatgagttcacccccagggctggtggctttgtcactggcagattcctcaccggcatcaaa
cctcctgagtttttcttccactgcatggcaggacgagagggcctggtcgacactgctgtg
aaaaccagccgctcaggctatctccaaaggtgcatcatcaagcacctggagggactggtc
gtgcagtatgatctcacggtccgtgacagtgacggcagtgtggtgcagttcctgtatggg
gaggatggcctggacatccccaagacacaattcctgcagcccaagcagttccccttcctg
gccagcaactacgaggtgataatgaaatcacagcatctccatgaagttttatccagagca
gatcccaaaaaagctctccgccacttcagagctatcaaaaaatggcaaagcaagcacccc
aacaccctgctgagaagaggtgccttcttgagttattcccagaaaattcaggaagctgtg
aaagccctgaatcttgagagtgaaaaccgcaatggccgcagcctcgggactcaggagatg
ctgaggatgtggtatgagttggatgaggagagccgaaggaaataccagaagaaggcggcc
acttgtcctgacccaagtctgtctgtctggcgtcctgacatctactttgcgtcagtgtca
gaaacatttgaaacaaaggttgatgactacggtcaagagtgggcagctcaaacagagaag
agttatgagaaatcagagctttctctcgacaggttgaggaccttgctgcaactgaagtgg
cagcgctcactgtgcgagccgggcgaggccgtgggcctgctggctgcccagagcatcgga
gagccctccacccagatgaccctcaacaccttccactttgcaggcagaggcgagatgaac
gtcaccctgggcattccaaggttgcgggagattctcatggtggccagtgccaacatcaag
acgcccatgatgagcgtgcctgtgctcaacaccaagaaagccctgaagaaagtgaaaagc
ctcaagaagcaactcaccagggtgtgcttaggagaggtgttgcagaaaattgacgtccag
gagtccttctgtatggaagaacaacagaacaaattccgggtgtaccagctgcggtttcag
ttcctgccacatgcatattaccagcaggagaagtgcctgagacccgaggacatcctgcgc
ttcatggaaacaagattctttaaacttctgatggaatccatcaaaaagaagaataataaa
gcatcagccttcaggagcgtaaatactcgaagagctactcagcgggatctggacaacgct
ggggagtcgaggaggagtcggggagagcaggagggtgatgaggaagaggaggggcacatt
gtggatgctgaagctgaggagggggacgccgatgcctctgatgccaaacgcaaggagaag
caggaggaggaggtggattatgagagtgaggaagaggaggagagggagggcgaggagaac
gacgatgaagacatgcaggaggaacgaaatccccacagggaaggtgctcgaaagacccga
gagcaagatgaagaggtgggctcaggcgctgaggaggacccgtcccttccctccctcctg
acgcagccccggaaacccacccacagccaggagccccaggggcccgaggccatggagcgc
cgggtccaggctgtgcgtgagatccactcgttcatagatgactaccagtatgacacggag
gagagcctgtggtgccaggtgacagtgaagctccctctgatgaagatcaactttgacatg
agctccctggtagtatctttggcccatggcgccgtcatctatgcgaccaagggcatcact
cggtgcctcctgaatgaaacaaccaacaataagaacgagaaggagcttgtgctaaacaca
gaaggaatcaacctcccagagctgttcaagtatgcagaggtcctggatctgcgccgcctc
tactccaacgacatccacgccatggccaacacgtacggcatcgaggccgcgctgcgggtg
atcgagaaggagatcaaggatgtgtttgccgtgtatggcatcgcggtcgaccctcgccat
ctctccctggttgctgattatatgtgctttgagggtgtctacaagccactgaatcgcttt
gggatccggtcaaactcttccccgctacagcagatgacatttgaaaccagcttccagttt
ctgaagcaagccaccctgctgggatcccacgatgagctgaggtctccttctgcctgtctt
gtggttgggaaggttgtcaagggcgggacaggcctgttcgagctcaagcagcccctgaga
tag
DBGET
integrated database retrieval system
