Symphalangus syndactylus (siamang): 129461631
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Entry
129461631 CDS
T10134
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X2
KO
K08737
DNA mismatch repair protein MSH6
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn01524
Platinum drug resistance
ssyn03430
Mismatch repair
ssyn05200
Pathways in cancer
ssyn05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129461631 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129461631 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
129461631 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
129461631 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyn03400
]
129461631 (MSH6)
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129461631 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
UPF0524
Motif
Other DBs
NCBI-GeneID:
129461631
NCBI-ProteinID:
XP_055096810
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All DBs
Position
14:complement(93127296..93154833)
Genome browser
AA seq
1362 aa
AA seq
DB search
MSRQSTLYSFFPKSPALSDANKASTRASREGGRAAAAPGASPSPGGDAAWSEAGPGPRPL
ARSASPPKAKNLNGGLRRSAAPAAPTSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGKSSKSKEAQKGGHFYSAKPEILRAMQR
ADEALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGS
RRSSRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVAR
KRKRMVTGNGSLKRKSSRKETPSATKRATSISSETKNTLRAFSAPQNSESQAHVSGGGDD
SSRPTVWYHESLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKS
QNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGY
KVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKY
LLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEK
GNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLTDDIGVMLPQV
LKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS
TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL
CAPLCNPYAINDRLDAIEDLMVVPDKISEVVELLKKLPDIERLLSKIHNVGSPLKSQNHP
DSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVIGIMEEVVDGFKSKILKQVISLQTKNP
EGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQ
RNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANL
INAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPV
ILLPEDTPPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEQENGKAYCVLVTGPNMG
GKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETA
SILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQ
NVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHR
KAREFEKMNQSLRLFREVCLASERSTVDAEAVHKLLTLIKEL
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcaccctgtacagcttcttccccaagtctccggcgctgagtgatgct
aacaaggcctcgaccagggcctcacgcgaaggcggccgtgccgctgctgcccccggggcc
tctccttccccaggcggggatgcggcctggagcgaggctgggcctgggcccaggcccttg
gcgcgctccgcgtcgccgcccaaggcgaagaacctcaacggagggctgcggagatcggca
gcgcctgcggcccccaccagttgtgacttctcaccaggagatttggtttgggccaagatg
gagggttacccctggtggccttgtctggtttacaaccacccctttgatggaacattcatc
cgcgagaaagggaaatcagtccgtgttcatgtacagttttttgatgatagcccaacaagg
ggctgggttagcaaaaggcttttaaagccatatacaggtaagagttcaaaatcaaaggaa
gcccagaagggaggtcatttttacagtgcaaagcctgaaatactgagagcaatgcaacgt
gcagatgaagccttaaataaagacaagattaagaggcttgaattggcagtttgtgatgag
ccctcagagccagaagaggaagaagagatggaggtaggcacaacttatgtaacagataag
agtgaagaagataatgaaattgagagtgaagaggaagtacagcctaagacacaaggatct
aggcgaagtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacatt
ggtggctctgatgtggaatttaagccagacactaaggaggaaggaagcagtgatgaaata
agcagtggagtgggggatagtgagagtgaaggcctgaacagccctgtcaaagtggctcga
aagcggaagagaatggtaactggaaatggctctcttaaaaggaaaagctctaggaaggaa
acgccctcagccaccaaacgagcaactagcatttcatcagaaaccaagaatactttgaga
gctttctctgcccctcaaaattctgaatcccaagcccacgttagtggaggtggtgatgac
agtagtcgccctactgtttggtatcatgaaagtttggaatggcttaaggaggaaaagaga
agagatgagcacaggaggaggcctgatcaccctgattttgatgcatctacactctatgtg
cctgaggatttcctcaattcttgtactcctgggatgaggaagtggtggcagattaagtct
cagaactttgatcttgtcatctgttacaaggtggggaaattttatgagctgtaccacatg
gatgctcttattggagtcagtgaactggggctggtattcatgaaaggcaactgggcccat
tctggctttcctgaaattgcatttggccgttattcagattccctggtgcagaagggctat
aaagtagcacgagtggaacagactgagactccggaaatgatggaggcacgatgtcgaaag
atggcacatatatccaagtatgatagagtggtgaggagggagatctgtaggatcattacc
aagggtacacagacttacagtgtgctggaaggtgatccctctgagaactacagtaagtat
cttcttagcctcaaagaaaaagaggaagattcttctggccatactcgtgcatatggtgtg
tgctttgttgatacttcactgggaaagtttttcataggtcagttttcagatgatcgccat
tgttcgagatttaggactctagtggcacactatcccccagtacaggtcttatttgaaaaa
ggaaatctctcaaaggaaactaaaacaattctaaagagttcattgtcctcttctcttcag
gaaggtctgatacccggctcccagttttgggatgcatccaaaactttgagaactctcctt
gaggaaggatattttagggaaaagctaaccgatgacattggggtgatgttaccccaggtg
cttaaaggtatgacttcagagtctgattccattgggttgacaccaggagagaaaagtgaa
ttggccctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcag
gagcttttatcaatggctaattttgaagaatatattcccttggattctgacacagtcagc
actacaagatctggtgctatcttcaccaaagcctatcaacgaatggtgctagatgcagtg
acattaaacaacttggagatttttctgaatggaacaaatggttctactgaaggaacccta
ctagagagggttgatacttgccacactccttttggtaagcgactcctaaagcaatggctt
tgtgccccactctgtaacccctatgctattaatgatcgtctagatgccatagaagacctc
atggttgtgcctgacaaaatctccgaagttgtagagcttctaaagaagcttccagatatt
gagagactactcagtaaaattcataatgttgggtctcccctgaagagtcagaaccaccca
gatagcagggctataatgtatgaagaaactacatacagcaaaaagaagattattgatttt
ctttctgctctggaaggattcaaagtaatgtgtaaagttatagggatcatggaagaagtc
gttgatggttttaagtctaaaatccttaagcaggtcatctctctgcagacaaaaaatcct
gaaggtcgttttcctgatttgactgtagaattgaaccgatgggatacagcctttgaccat
gaaaaggctcgaaagactggacttattactcccaaagcaggctttgattctgattatgac
caagctcttgctgacataagagaaaatgaacagagcctcctggaatacctagagaaacag
cgcaacagaattggctgcaggaccatagtctattgggggattggtaggaaccgttaccag
ttggaaattcctgagaatttcaccactcgcaatttgccagaagaatacgaactgaaatct
accaagaagggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctc
ataaatgctgaagaacggagagatgtatcattgaaggactgcatgcggcgactgttctat
aactttgataaaaattacaaggactggcagtctgctgtagagtgtatcgcagtgttggat
gtcttactgtgcctggctaactatagtcgagggggtgatggtcctatgtgtcgcccagta
attctgttgccagaagataccccacccttcttagagcttaaaggatcacgccatccttgc
attacgaagactttttttggagatgattttattcctaatgacattctaataggctgtgag
gaagaggagcaggaaaatggcaaagcctattgtgtgcttgttactggaccaaatatgggg
ggcaagtctacgcttatgagacaggctggcttattagctgtaatggcccagatgggttgt
tacgtccctgctgaagtgtgcaggctcacaccaattgatagagtgtttactagacttggt
gcctcagacagaataatgtcaggtgaaagtacattttttgttgaattaagtgaaactgcc
agcatactcatgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggt
actgcaacatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagact
ataaaatgtcgtacattattttcaactcactaccattcattagtagaagattattctcaa
aatgttgctgtgcgcctaggacatatggcatgcatggtagaaaatgaatgtgaagacccc
agccaggagactattaccttcctctataaattcattaagggagcttgtcctaaaagctat
ggctttaatgcagcaaggcttgctaatctcccagaggaagttattcaaaagggacataga
aaagcaagagaatttgagaagatgaatcagtcactacgattatttcgggaagtttgcctg
gctagtgaaaggtcaactgtagatgctgaagctgtccataaattgctgactttgattaag
gaattatag
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