Symphalangus syndactylus (siamang): 129461633
Help
Entry
129461633 CDS
T10134
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn01524
Platinum drug resistance
ssyn03430
Mismatch repair
ssyn05200
Pathways in cancer
ssyn05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129461633 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129461633 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
129461633 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
129461633 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyn03400
]
129461633 (MSH2)
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129461633 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
129461633
NCBI-ProteinID:
XP_055096819
LinkDB
All DBs
Position
14:complement(93403526..93539567)
Genome browser
AA seq
948 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQY
MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER
LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ
ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQHFLWISSLLIFLSVENH
EFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVT
CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISS
GYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIMLKASRHACVEVQD
EIAFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVD
CILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAI
SEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSF
GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQE
FLSKVKQMPFTEMSEENITRKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgcttcagttggagagcgcggccgaggtcggcttcgtg
cgcttctttcagggcatgccggagaagccgaccaccacggtgcgccttttcgaccggggc
gacttctatacggcgcacggcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtgatcaagtacatggggccggcaggagcaaagaatctgcagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcatccaaggagaatgattggtatttggca
tataaggcttctcctggcaatctctctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtgttaaaatgtctgcagtcgatggccagagacag
gttggagttgggtatgtggattccatacagaggaaactaggactgtgtgaattccctgat
aatgatcagttctccaatcttgaggctctcctcatccagattggaccaaaggaatgtgtt
ttacctggaggggagactgctggagacatggggaaactgagacagattattcaaagagga
ggaattctgatcacagaaagaaaaaaagctgacttttccacaaaagacatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacagatgatgaatagtgctgtattgcca
gaaatggagaatcaggttgcagtttcatcactatctgcggtaatcaagtttttagaactc
ttatcagatgattccaattttggacagtttgaactgactacttttgacttcagccagtac
atgaaattggatattgcagcagtcagagcccttaacctttttcagggttctgttgaagat
accactggctctcagtctctggctgccttgctgaataagtgtaaaacccctcaaggacaa
agacttgttaaccagtggattaagcagcctctcatggataagaacagaatagaggagaga
ttgaatttagtggaagcttttgtagaagatgcagaattgaggcagactttacaagaagat
ttacttcgtcgattcccagatcttaaccgacttgccaagaagtttcaaagacaagcagca
aacttacaagattgttaccgactctatcagggtataaatcaactgcctaatgttatacag
gctctggaaaaacatgaaggaaaacaccagaaattattattggcagtttttgtgactcct
cttactgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagat
atggatcagcatttcttgtggattagttcactacttattttcttatctgtggaaaaccat
gaattccttgtaaaaccttcatttgatcctaatctcagtgaattaagagaaataatgaat
gacttggaaaagaagatgcagtcaacattaataagtgcagccagagatcttggcttggac
cctggcaaacagattaaactggattccagtgcacagtttggatattactttcgtgtaacc
tgtaaggaagaaaaagtccttcgtaacaataaaaactttagtactgtagatatccagaag
aatggtgttaaatttaccaacagcaaattgacttctttaaatgaagagtataccaaaaat
aaaacagaatatgaagaagcccaggatgccattgttaaagaaattgtcaatatttcttca
ggctatgtagaaccaatgcagacactcaatgatgtgttagctcagctagatgctgttgtc
agctttgctcatgtgtcaaatggagcacctgttccatatgtacgaccagccattttggag
aaagggcaaggaagaattatgttaaaagcatccaggcatgcttgtgttgaagttcaagat
gaaatcgcatttattcctaatgacatatactttgaaaaagataaacagatgttccacatc
attactggccccaatatgggaggtaaatcaacatatattcgacaaactggggtgatagta
ctcatggcccaaattgggtgttttgtgccatgtgagtcagcagaagtgtccattgtggac
tgcatcttggcccgggtaggggctggtgacagtcaattgaaaggagtctccacgttcatg
gctgaaatgttggaaactgcttctatcctcaggtctgcaaccaaagattcattaataatc
atagatgaattgggaagaggaacttctacctacgatggatttgggttagcatgggctata
tcagaatacattgcaacaaagattggtgctttctgcatgtttgcaacccattttcatgaa
cttactgccttggccaatcagataccaactgttaataatctacatgtcacagcactcacc
actgaagagaccttaactatgctttatcaggtgaagaaaggtgtctgtgatcaaagtttt
gggattcatgttgcagagcttgctaatttccctaagcatgtaatagagtgtgctaaacag
aaagccctggaactcgaggagtttcagtatattggagaatcacaaggatatgatatcatg
gaaccagcagcaaagaagtgctatctggaaagagagcaaggtgaaaaaattattcaggag
ttcctgtccaaggtgaaacaaatgccctttactgaaatgtcagaagaaaacatcacaaga
aagttaaaacagctgaaagctgaagtaatagcaaagaataatagctttgtaaatgaaatc
atttcacgaataaaagttactacgtga
DBGET
integrated database retrieval system
