Symphalangus syndactylus (siamang): 129462011
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Entry
129462011 CDS
T10134
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
129462011 (RAI1)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
129462011 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
129462011
NCBI-ProteinID:
XP_055097564
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All DBs
Position
14:65810281..65941551
Genome browser
AA seq
1906 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPSYE
GGAGTPSGTAAAVAADKYHRGSKALPTQQALQGRPAFPGYSVQDSSPYPGRYAGEESLQA
WGAPQPPPPQPQPLPAGVAKYDENLMKKTAVPPTRQYAEQGAQVPFRTHSLHVQQPPPPQ
QPLAYPKLQRQKLQNDIASPLPFPQGTHFPQHSQSFPTSSTYSSSVQGGGQGAHSYKSCT
APTAQPHDRPLTASSSLAPGQRVQNLHAYQSGRLSYDQQQQQQQQQQQQALQSRHHAQET
LHYQNLAKYQHYGQQGQGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSP
LMPNLENFPYSQQPLSTGAFPAGITDHSHFMPLLNPSPTDATSSLDTQAGNCKPLQKDKL
PENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGVKNLVSRTPEQHKSQHCS
PEGSGYSAEPAGTPLSEPLSSTPQSTHAEPQEADYLSGSEDPLERSFLYCSQARGSPARV
NSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKFVAGERDCPRLLLSAL
AQEDLASEILGLQEAIGEKADKAWAEAPSLVKDSSKPPFSLENHSVCLDSVAKSAWPRPG
EPEALPDSLQLDKGGNAKDFSPGLFEDPSVAFATPDPKKTTGPLSFGTKPTLGAPAPDPT
TAAFDCFPDTTAASSADSANPFAWPEENLGDACPRWGLHPGELTKGLEQGGKASDGISKG
DTHEASACLGFQEEDPPGEKVASLPGDFKQEEVGGVKEEAGGLLQCPEVTKADRWLEDSR
HCCSTADFGDLPLLPPTSRKEDLEAEEEYSSLCELLGSPEQRPGMQDPLSPKAPLICTKE
EVEEVLDSKASWGSPCHLSGESVILLGPTVGTESKVQSWFESSLSHMKPGEEGPDRERAP
GDSTTSDASLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPK
DLLLPESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSLTALSEPRTPGPPGLTTTPAPPD
KLGGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPSTPGKDQR
SMILRSRTKTQEIFHSKRRRPSEGRLPNCRATKKLLDNSHLPATFKVSGSPQKEGRVSQR
ARVPKPGAGSKLSDRPLHALKRKSAFMAPVPTKKRNLVLRSRSSSSSNASGNGGDGKEER
PEGSPTLFKRMSSPKKAKPAKGNGEPTTKSPPPETPDACLKLASRAAFQGAMKTKVLPPR
KGRGLKLEAIVQKITSPSLKKFTCKAPGASPGNPLSPSLPDKDRGLKGAGGSPVGVEEGL
VNVGTGQKLPASSGADPLCRNPTNRSLKGKLMSSKKLSSTDCFKTEAFTSPEALQPGGTA
LAPKKRSRKGRAGALGLSKGPLEKRPYLGPALLLTPRDRASGTQGASEDNSGGGGKKPKM
EELGLAFQPPEGRPCQPQTRAQKQPGHTNYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRR
QQQVLPLDPAEPEIRLKYISSCKRLRSDSRTPAFSPFVRVEKRDAFTTICTVVNSPGDAP
KPHRKPSSSASSSSSSSSFSLDAAGASLATLPGGSILQPRPSLPLSSTMHLGPVVSKALS
TSCLVCCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEEASLPLERTLK
GPDCAAAAAAGKPPRPDSSADPAKQGPLRTSARGLSRRLQSCYCCDGREDGGEEAAPADK
GRKHECSKEAPAEPGGEAQEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMTCSSCQ
EAGATIGCCHKGCIHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggagacatcacgcctggagaattacaggcagccgagtcaggccgggctaagctgc
gaccggcagcggctgctcgccaaggactattataacccgcagccttacccgagctatgag
ggtggcgctggcacgccctctggcactgcagccgcggtggccgccgacaagtaccaccga
ggcagcaaggccctgcccacacagcaagccctgcaggggaggccggctttccccggctac
agcgtccaggacagcagcccctacccaggccgctatgctggtgaggagagccttcaggct
tggggggccccacagccaccacccccacagccgcagccactaccagcaggggtggccaag
tatgatgagaacttgatgaaaaagacagcagtgccccccaccaggcagtatgcagagcag
ggcgcccaggtgccctttcggactcactccctgcacgtccagcagccaccgccgccccag
cagcccctggcataccccaagctccaaaggcagaagctgcagaacgacattgcctcccct
ctgccattcccccagggtacccactttcctcagcattcccagtccttccccacctcctcc
acctactcctcctctgtccagggtggtgggcagggggcccactcctataagagttgcaca
gcaccgactgcccagccccatgacaggccgctgactgccagctccagcctggccccgggg
cagcgggtccagaatcttcatgcctaccagtcgggccgcctcagctatgaccagcagcag
cagcagcagcagcagcagcagcagcaagcccttcagagccggcaccatgcccaggaaacc
ctccattaccaaaacctcgccaagtatcagcactacgggcaacaaggccagggctactgc
cagccggacgcagccgtccggaccccagagcagtactaccagaccttcagccccagctcc
agccactcacccgcccgctccgtgggccgctcaccttcctacagctccacgccgtcgccg
ctgatgccaaacctggagaactttccctatagccagcagccgctcagcaccggggccttc
cctgcagggatcactgaccacagccacttcatgcccctgctcaatccctccccaacggat
gccaccagttccttggacacccaggctggcaactgcaagccccttcagaaggacaagctt
cctgagaacctgctgtcagatctcagcctgcagagcctcacggcgctgacctcacaggtg
gagaacatctccaacactgtccagcagttgctgctctccaaggctgctgtgccgcaaaag
aaaggtgtcaagaacctcgtgtccaggaccccagagcagcacaaaagccagcactgcagc
cccgaagggagcggctactcggccgagcccgcgggcacaccgctgtcagagccactgagt
agcacgccacagtccacgcatgcagagccgcaggaggccgactacctgagcggctccgag
gacccactggagcgcagcttcctctactgcagccaggcccgtggcagccctgccagggtc
aacagcaactcgaaggccaagcccgagtccgtgtccacctgttctgtaacctctcctgac
gacatgtccaccaaatctgacgactccttccagagcctgcacagcagtctgccgctcgac
agcttctccaagttcgtggcgggtgagcgggactgtccgcggctgctgctcagcgccctg
gcacaggaggacctggcctccgagatcctaggactgcaggaagccatcggcgagaaggct
gacaaagcttgggccgaagcacccagcctggtcaaggacagcagcaagccacccttctcg
ctggagaaccacagcgtctgcctggactctgtggccaagagtgcgtggccccggcctggg
gagccagaggccctgcccgactccttgcagctggacaagggcggcaatgccaaggacttc
agcccagggctgtttgaagacccttctgtggccttcgctacccctgaccccaaaaagaca
actggtcctctctcctttggcaccaagcccacccttggggctcctgctccagaccccacc
acagcagcttttgactgtttcccagacacgaccgctgccagctcagcggacagtgccaac
ccttttgcctggccagaggaaaacctgggggatgcttgtcccaggtggggattgcaccct
ggcgagctcaccaagggcctggagcagggtgggaaggcctcagatggcatcagcaaaggg
gacacccatgaggcttcggcctgcctgggcttccaggaggaggacccccctggggagaag
gtggcctcattgcccggggacttcaagcaggaggaggtgggtggggtgaaggaggaggca
ggcgggctgctgcagtgccccgaggtgaccaaggctgaccggtggctggaagacagccgg
cactgctgttccaccgccgactttggggacctcccactgctgccacccaccagcaggaag
gaggacctggaagctgaggaggagtactcctccctatgtgagctcctgggcagccccgag
cagaggcccggcatgcaggacccgctgtcacccaaggccccactcatctgcaccaaggag
gaggtggaggaggtgctggactccaaggccagctggggctctccatgccacctctcaggg
gagtccgtcatcctgctgggccctaccgtgggcaccgagtcaaaggtccagagctggttt
gagtcctctctgtcccacatgaagccaggtgaagaggggcctgatagggagcgagctcca
ggggattccaccacctcagatgcctctctggcccagaagcccaacaagcctgctgtgccc
gaggcgcccatcgcgaagaaagagcctgtgccacggggcaaaagcttacggagccgtcgg
gtgcaccgggggctgcccgaggccgaggactccccatgcagggcaccagcactgcccaaa
gacctcttgctccctgaatcctgcacagggcccccacagggacagatggaaggggctgga
gccccaggccggggggcctcggaagggctccccaggatgtgtactcgttctctcacagcc
ctgagtgagccccgcacacctgggcccccaggcctgaccaccacccctgcacccccagac
aaactggggggcaagcagcgagccgccttcaagtcgggcaagcgggtggggaagccctca
cccaaggctgcctccagccccagcaacccggccgccctgcctgtggcctccgacagcagc
ccgatgggctccaagaccaaggagacagactcgcccagcacgcctggcaaggaccagcgc
tccatgatccttcggtcacgcaccaaaacccaggagatcttccactccaagcggcggagg
ccctctgagggccggctccccaactgccgtgccaccaagaagctcctcgacaacagccac
ttgcctgccacgttcaaggtctccggcagcccccagaaggagggcagggtgagccagcgg
gcaagggtccccaaacctggcgcaggcagcaagctctctgaccgacccctccatgcgctc
aaaaggaagtcggccttcatggcgccggtccccaccaagaagcggaacctggtcttgcgg
agccgcagcagcagcagcagcaacgccagtggcaatgggggagatgggaaggaggagagg
cccgagggttcccccaccctcttcaagaggatgtcttctcccaagaaagccaagcccgcc
aagggcaacggcgagcccaccacaaagtccccacccccggagacccccgatgcctgcctc
aagctcgcctctcgggcagccttccagggggccatgaagaccaaggtgctgccaccccgg
aagggccggggcctgaagctggaagccatcgtgcagaagatcacctcacccagcctcaag
aagttcacatgtaaagctccaggggcctctcctggtaatcctctgagcccatcccttccc
gacaaagaccgtgggctcaagggtgctgggggcagcccagtgggggtagaagaaggcctg
gtaaatgtgggcaccgggcagaagcttccggcttcttctggggctgatccattatgcaga
aatccaaccaacagatccttaaaaggcaaactcatgagcagtaagaaactgtcttcgact
gactgtttcaaaactgaggcctttacatccccagaggccctgcagcctggggggactgcc
ctggcacctaagaagaggagccggaaaggccgggcaggggcccttggactctccaaaggc
ccgctggagaagcggccctatcttggcccagctctgctcctgactccccgagacagggcc
agtggcacacaaggggccagcgaggacaactctggtggaggaggcaagaagccaaagatg
gaagagctgggcctggccttccagccccccgagggcaggccctgccagccccagacaagg
gcacagaaacagccaggccacaccaactatagcagctattccaagcggaagcgcctcact
aggggccgggccaagaacaccacctcttcaccctgtaaggggcgtgccaagcgacgacgg
cagcagcaggtgctgcccctggatcccgcagagcctgaaatccgcctcaagtacatttcc
tcttgcaagcggctgaggtcagacagccggacccccgccttctcacccttcgtgcgggtg
gagaagcgagatgcgttcaccaccatatgcactgttgtcaactcccctggagatgcgccc
aagccccataggaagccttcctcctctgcctcctcttcctcatcctcatcctcgttctcc
ttggatgcagccggggcctccctggccacactccctggaggctccatcctgcagcctcgg
ccctccttgcccctctcctccacgatgcacttggggcctgtggtttccaaggccctgagt
acctcttgccttgtttgctgcctctgccaaaacccggccaacttcaaggaccttggggac
ctctgtgggccctactaccctgaacactgcctccccaaaaagaagccaaaactcaaggag
aaggtgcggccagaaggcacctgtgaggaggcctcgctgccgcttgagagaacactcaaa
ggtcccgactgtgcagctgctgccgctgccgggaaaccccccaggcctgacagctcagct
gacccggccaagcagggcccactgcgcaccagtgccaggggcctgtcccggaggctgcag
agctgctactgctgtgatggccgggaggatgggggcgaggaggcagccccagccgacaag
ggtcgcaaacatgagtgcagcaaggaggccccggcagagcccggcggggaggcccaggag
cactgggtgcacgaggcctgtgccgtgtggaccagtggcgtctacctggtggccgggaag
ctctttgggctgcaggaggccatgaaggtggccgtggacatgacgtgttccagctgccaa
gaagccggggccaccattgggtgctgccacaaaggatgcatccacacctaccactacccg
tgtgccagtgatgcaggttgcatattcatcgaagagaacttttctttgaaatgtcccaaa
cataagaggctgccgttgtaa
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