Symphalangus syndactylus (siamang): 129462792
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Entry
129462792 CDS
T10134
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssyn03037
]
129462792 (IFT140)
Cilium and associated proteins [BR:
ssyn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
129462792 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_EML
TPR_GEMI5
WD40_Prp19
WDR55
Beta-prop_HPS5
TPR_COPA_B
TPR_IFT80_172
WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
PPR_2
tRNA_int_end_N2
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129462792
NCBI-ProteinID:
XP_055099099
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All DBs
Position
14:117271076..117372943
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AA seq
1462 aa
AA seq
DB search
MALYFDHQIEAPDAAGSPSHISWHPVHPFLAVAYISTTSAGSVDIYLEQGECVPDTHVER
PFRVASLCWHPTRLVLALGWETGEVTVFNKQDKEQHTMPLTHTADITVLNWSPSGNCLLS
GDRLGVLLLWRLDQRGRVRGTPLLKLEYGKHLTHCIFRLPAPGEDLLQLAKAAVSGDEKA
LDMFNWKKSSSGSLLKTGSQEGLWFFVSLMDGTVHYVDEKGKTTQVVSADSAIQMLFYME
KREALVVVTENLRLSLYTVPPEGEAEEVMKVKLSGKTGHRADITLIEGSLLVMAVGEAAL
RFWDIERGENYILSPDEKFGFEKGENMNCVCYCKVKGLLAAGTDRGRVAMWRKVPGFLGS
PGAEGKDRWALQTPTELQGNITQIQWGSRKNLLAVNNVISVAILSERAMSSHFNQQVAAV
QVSPSLLNVCFLSTGIAHSLRTDMHISGVFATKDAVAVWNGRQVAIFELSGAAIRSAGTF
LCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFLDVCGNFLVVGTDL
AHFKSFDLSRREAKAHCSCRNLAELVPGAGGIASLRCSSSGSTVSILPSKADNSPDSKIC
FYDVEMDTVTIFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYVPVNHFWDQSEPRL
FVCEAVQETPCSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLLHESFPRPAASHSL
LGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLEDCDKATRDAMLHFS
FFVTIGDLDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREAE
QEPELEARVAVLATQLGMLEDAEQLYRKCKRHDLLNKFYQAAGRWQEALQVAEHHDRVHL
RSTYHRYAGHLEASADCSQALSYYEKSDTHRFEVPRMLSEDLPSLELYVNKMKDKTLWQW
WAQYLESQGEMDAALHYYQLAQDHFSLVRIHCFQGNVQKAAQIANETGNLAAAYHLAREY
ESQEEVGQAVHFYTRAQAFKNAIRLCKENGLDDQLLNLALLSSPEDMIEAARYYEEKGVQ
MDRAVMLYHKAGHFSKALELAFATQQFAALQLIAEDLDETSDPALLARCSDFFIEHSQYE
RAVELLLAARKYQEALQLCLEQNMSVTAEMAEKMTVAKDSSDLPEESRRELLEQIANCCM
RQGSYHLATKKYTQAGNRLKAMRALLKSGDTEKITFFASVSRQKEIYIMAANYLQSLDWR
REPEIMKNIISFYTKGQALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLAKAKAK
SPLDQETRLAQLQSRIALVKRFIQARRTYTEDPKESIKQCELLLEEPDLDSTIRIGDVYG
FLVEHYARKEEYQTAYRFLEEMRRRLPSANMSYYVSPRAVDAVHQGLGLPLPRTVPERVR
HNSMEDAREPDEEVVEEEDDDP
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggccctctactttgaccaccagatagaagccccggatgcagcggggtcaccctcacac
atcagctggcaccctgtccatccattcttggcagttgcttacatcagcacaacctcagca
ggcagcgtggatatttacctggagcaaggggagtgcgtgccggatacacatgtcgagagg
ccattccgggttgcttccctgtgctggcacccgacgcggctggtgctggctctgggctgg
gagactggggaagtgacggtgtttaacaagcaggacaaggagcagcacacgatgcctctg
acacacacggccgacatcaccgtgctcaattggagccccagtggaaactgcctgctgtct
ggcgacaggcttggtgtcttgctcttgtggaggttggaccaaaggggccgagtgcgaggg
acgcccctgctgaaactcgagtatgggaaacacctcacgcactgcatcttccggctcccc
gctcctggcgaggacctgcttcagttggcaaaggcagctgtgagtggcgatgagaaagcc
ctggacatgtttaactggaagaagagcagctctggaagtttgctgaagacaggatctcag
gagggactgtggttctttgtcagtctgatggatgggacggtgcactatgtggatgagaag
ggtaagaccactcaggtggtgtccgcagacagcgcgattcagatgctgttctacatggag
aagagggaggcactggtggtggtcacggagaacctccggctgtccctgtacacggtgcct
cctgagggcgaagcagaagaagtgatgaaggtcaagctgagcgggaaaaccggccaccgg
gcagacatcactttgattgaaggcagccttctcgtgatggccgtcggggaggctgccctc
agattctgggatatagaacgaggagagaattatatactgagtccagatgagaagtttggc
tttgagaaaggagagaatatgaactgtgtttgttactgtaaagtcaaaggtcttctggcc
gctggtaccgacagagggcgagtagccatgtggagaaaagtaccaggcttcctgggcagc
cccggggcagagggcaaggacaggtgggcccttcagacccctactgagctccaaggaaac
atcacgcaaatccagtggggttccaggaagaacctgctggcagtgaacaacgtcatctcc
gtggccatcctcagcgagcgggccatgtcgtcacacttcaaccagcaagtggccgccgtg
caggtctccccaagcctgctgaatgtgtgcttcctgtccacggggatcgcacacagcctg
cgcaccgacatgcacatcagtggggtgtttgccaccaaggatgctgtcgcagtctggaac
ggaaggcaggtggcgatctttgagctttctggagccgcgatacggagtgcagggaccttc
ttgtgtgagacacccgtgttagcaatgcatgaagaaaacgtttacacggtggagtcaaac
cgagttcaagttcgaacctggcaggggactgtcaaacaactcctcctcttctcagagact
gaggggaacccctgcttcttggacgtctgtgggaatttcctggttgtagggacagacttg
gctcactttaaaagctttgatctttcccgaagagaggccaaagcacactgcagctgcagg
aacctggcggagctggtccccggggcggggggcatcgcttctctgcggtgcagcagcagc
gggagcactgtcagcatcctccccagcaaggctgacaacagccccgattccaaaatctgc
ttctacgatgttgaaatggacacagtgaccatctttgacttcaagactggacaaattgat
cggagagagacgctgtcctttaatgagcaagagactaataagagccacctctttgtggat
gagggactgaaaaattatgttcccgtgaaccacttctgggaccagagcgagccccggcta
tttgtgtgtgaagccgtgcaggagacgccgtgctcccagcctcagtctgcaaacgggcag
ccccaagatgggcgcgctggccctgcggcagatgttttgatcctgtccttcttcatttcc
gaagagcacggcttcctgcttcatgagagcttcccccggcctgccgcctcccacagtctc
ctggggatggaagtgccttattactacttcacaagaaagcccgaagaagcagacagagaa
gacgaggtagagcctgggtgccaccacatccctcagatggtgtccaggagacccctgcga
gacttcgtggggctggaggactgcgacaaggccacccgggacgccatgctccacttcagc
ttcttcgtcaccatcggagacttggacgaagccttcaaatccatcaagctcatcaaaagc
gaggccgtctgggagaacatggcgcgcatgtgcgtgaagacccagcgactggacgtggcc
aaggtgtgcctggggaacatgggccatgcccgcggggcccgagcgctgcgtgaggcggag
caggaaccggagctagaggcccgcgtggccgtgctggccacacagctgggcatgctggag
gatgccgagcagctgtacaggaagtgcaagcgccacgacctcctgaacaagttctaccag
gctgcgggccggtggcaggaggccctccaggtagccgagcaccatgaccgcgtgcaccta
cgcagcacctaccaccgctacgccgggcacctggaggccagcgccgactgcagccaggcc
ctcagttactacgagaagtcagacacgcaccgcttcgaggtgcccaggatgctgtcggag
gacctgccgtccctggagctctacgtgaataaaatgaaggataagaccctgtggcagtgg
tgggcgcagtacctggagagccagggcgagatggacgccgcgctgcactactaccagctg
gcccaggaccacttctccctggtccgcatccactgcttccagggcaatgtccagaaggct
gcgcaaatagccaacgagacaggaaacctggcagccgcctaccacctcgcccgcgagtac
gagagtcaggaggaggtcggtcaggcggtacacttctacacccgggcacaggccttcaag
aatgccatccgcctgtgcaaggagaatggcctggacgaccagctcctgaacttggccctg
ctgagctcacccgaggacatgattgaggcggcccgatactatgaggagaagggcgtgcag
atggacagggcggtcatgctgtaccacaaggctggccacttctccaaggccctggagctg
gcctttgccacccagcagtttgcggccctgcagctcatagcagaggacctggatgagacg
tcagaccctgcactcctggcccgctgctccgacttcttcatcgagcacagtcagtacgag
agggcagtggagctgctgctggccgccaggaagtatcaggaagccctgcagctgtgcctg
gagcagaacatgagcgtcaccgcggagatggcggaaaagatgaccgtggccaaggactcc
tcggacctgcctgaggagtcgcggcgggagctgctggagcagatagcaaactgctgcatg
cgccagggcagctaccacctggccaccaagaagtacacgcaggccggcaacaggctgaag
gccatgagggcgctgctcaaatccggagacacagagaaaatcacgttcttcgcgagcgtg
tccaggcagaaggaaatctacatcatggctgctaactacctgcagtccctggactggcgg
agggagccagagatcatgaagaacatcatcagcttctacaccaaggggcaggccctggac
ctcctggccggcttttatgacgcttgtgcccaggtggagattgatgaataccagaactac
gacaaagcccatggggcgctgactgaggcctacaagtgcctggccaaggccaaggccaag
agccccctggaccaggagaccaggctggcgcagctgcagagcaggatagcactggtgaag
aggttcatccaggcccgcaggacatacacggaggaccccaaggagtccatcaagcagtgt
gagctgctcctggaggaaccagacctggacagcaccatccgcatcggggacgtctatggc
ttcctggtggagcactacgcgcggaaggaggagtaccagacggcctacagattcctggag
gagatgcggcggcggcttccctcggccaacatgtcctactacgtaagcccgcgggccgtg
gacgccgtgcaccaggggctgggtctcccgctgccacgcaccgtgcccgagcgggtccgc
cacaacagcatggaggacgccagggagccggacgaggaggtggtggaagaggaagacgac
gatccctga
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integrated database retrieval system
