Symphalangus syndactylus (siamang): 129462861
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Entry
129462861 CDS
T10134
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
129462861 (HELZ)
3'-5' decay
Other 3'-5' decay factors
129462861 (HELZ)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129462861
NCBI-ProteinID:
XP_055099282
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Position
14:23532392..23710350
Genome browser
AA seq
1943 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL
LYRIASFLQLKNYVQADEDCRHVLGEGVAKGEDAFRAVLCCMQLKGKLQPVSTILARSLT
GESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHAQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPALGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
TIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPE
SRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTL
LNQQQNNLPEQPNQMPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHR
PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRI
HGSVALETLRQQQARFQQWSEHHAFLNQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADW
KLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQTRSPPAVP
SPPSSTDHSSHFSNFNDNSRDLEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAP
DGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSS
SSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFS
SPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSV
LQHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDP
LSLFQELSLGSSSGSNGFYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgaatcacttaagaggcag
gactatgaaatggccctcaagcactgcacagaggcccttctttctcttggccagtactcc
atggcagacttcacagggccttgtccattggaaatagaacgcatcaaaatcgagagtctt
ctctacagaattgcctcatttttgcaactgaaaaattatgtgcaagctgatgaagattgt
agacatgtgctgggagaaggagtggccaaaggagaggatgcatttcgggcagtgctttgt
tgcatgcagctgaaagggaagctccaacctgtatccaccattcttgccaggtcactgaca
ggagagtccctgaatgggatggtaacaaaggatttgacaagactaaaaacacttctctca
gaaacagagacagcaactagtaacgccctctctggatatcacgtggaagacttagatgag
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatacgcttcacggctgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattgtctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcacaatcctgacctgtcagttactgtcagcaccaaaaaatcccaccagaca
tggacctttgctctcacctgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatctcgaatacctgatgcatgcaaaacagcagctagta
accacagctaaacgttgggattcttcctctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcccctctctgctgaccag
ctatttacccagtccgttttagacaaatcattgaccaagagcaactatcagtcacggtta
catgaccttctttatattgaggagatagcccagtataaagaaatcagcaagttcaacctt
aaagtgcaattgcagattctggcaagcttcatgctcactggtgtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggcaggacgactggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaacagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaggaatatatatttttaaggctatctagggaatgctgtgaagaacttaat
cttcggcctgactgtgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcactatgcactagacaggatcaaggacaatggggttttgtttccagacatc
agtatgactcccaccataccatggagtcctaacagacaatgggatgaacagttggatcct
cgactaaatgcaaaacagaaagaggctgttctggccattaccactccacttgcaatccag
ctgccgcctgtgcttatcatcggaccctatgggacaggcaaaacgttcactctagctcag
gctgtcaaacatattctgcagcaacaggagactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccccagaaa
gaagatattcttaaacatcgagtggtggttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacattctattagatgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcgttagcaactcaaaacactcggattgtcttg
gctggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcacgtttcattacttgaccgactctatgagcattaccctgctgagttcccatgtagg
attctcctgtgtgagaactaccgctcccatgaagctatcatcaattatacctctgagctt
ttctatgagggcaaactgatggccagtgggaagcagccagcacacaaagatttctaccca
ctaactttctttacagcacgaggagaagatgtacaagaaaaaaatagcacagctttttat
aataatgcagaggtgtttgaagtggtggaacgtgtagaagagttaagaaggaagtggcca
gtagcgtgggggaagttagatgatggcagtattggtgtggtgactccatatgctgatcaa
gtgtttagaatacgtgctgaacttcgaaaaaagagattatctgacgttaatgtagaaagg
gtgctaaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaaga
catacttgtaaacataaacagacaccaattaaaaagaaagagcaacttctggaagattcc
acagaggacttagattacggttttttatctaactacaagcttctcaatactgccatcaca
agagcacaatccctggttgctgtggtgggtgatcccattgctctgtgctctgttggaaga
tgcaggaaattttgggaacggtttattgccctgtgtcatgaaaacaatagcctacatgga
atcactttcgaacagatcaaagcccagttagaggctttagaactaaagaagacatacgtg
ttgaatccgctggcacctgaatttatcccccgggctctaagactgcagcattcaggaagt
accaacaaacagcagcaatcaccacccaaggggaaaagtcttcatcatgcccagaatgat
cacttccagaatgatggaattgttcagcccaatccttctgtacttattggcaatcctatt
agagcatatactcctccacccgctcttggacctcacccaaatttgggaaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgcggttgatcctcgaattattacacatcaggcagcaatggcctataacatgaaccta
ttacagacacatggacgaggatctcctattccttatggccttggacatcacccacctgtc
accataggccagccacaaaatcagcatcaggagaaggatcaacatgagcaaaatcgaaat
ggtaaaagcgatacaaataattccggacctgaaattaataagattcgaacaccagagaaa
aagccaacagaaccaaaacaggttgatttggaatcaaatccacagaacagaagtcctgaa
tcacgtcctagtgttgtttatcccagtaccaaatttcctcgcaaagataatctcaaccca
agacacataaatcttccccttcctgctccccacgcacagtatgcaatccctaatcgccat
tttcatccccttccccagctaccaagaccaccctttccaattccgcagcagcacaccttg
ttaaatcagcagcagaataatttgcctgaacaaccaaatcagatgccacctcagccaaat
caggtagtccagcagcaaagtcagttgaatcagcagcctcagcagccacctcctcagctt
tctcctgcatatcaggcgggacccaacaatgctttttttaatagtgcagttgctcatagg
ccacagtctcctcctgcagaagctgtaattccggagcagcagccccctcccatgctgcaa
gaaggccacagtcctctgagagccattgcacaacccggccccattcttccttcacatctg
aatagcttcattgatgagaacccctcaggattacctataggggaggctttagatcgtata
catgggagtgtcgctctggaaacattaaggcagcagcaggcacggttccagcagtggagc
gagcatcatgcctttctcaatcagggcagcgttccatacccacaccatcaccatcctcac
ctgcagcatcttcctcagccgcccctgggattacatcagccgccagtgcgggcagactgg
aagctcaccagcagtgccgaagatgaagtggagaccacatactcaaggtttcaagactta
atcagagaactgtctcatcgtgatcaaagtgaaacacgggaactagctgaaatgccacca
cctcaatcaagacttttgcaatatagacaagtacaaactagaagcccaccagcagtccca
tctcccccatccagtacagaccacagtagccacttttctaactttaatgataatagcaga
gaccttgaagtagccagcaacccagcatttccacagcgcctcccaccccagatattcaac
tcacctttctcgttgccatctgaacaccttgcccctcctcccttgaaatacctggcacct
gatggagcatggacttttgctaacttgcaacagaatcacctaatggggccaggttttccc
tatggcctacctccattgcctcacaggccaccgcagaacccttttgtacaaatacagaat
catcaacatgctattggtcaagagccatttcacccattgtcatctcgaacagtatcttct
tcttcgctccctagcttagaagagtatgagcccagaggacctggtcggcccttgtaccaa
agaagaatctcatctagctcagttcaaccttgttctgaagaagtaagcactcctcaagac
agtctggctcagtgtaaagagcttcaggaccacagtaaccagtcttctttcaacttttca
tccccggagtcctgggtaaacaccacctcatctactccttatcagaacattccatgcaat
ggatccagcaggacagctcagcccagagagttgatagcgccacccaagactgtcaaaccc
cctgaggatcaactgaagtcggagaacctcgaggtgtccagttccttcaactacagtgtg
ctgcagcatctcggccagtttccaccccttatgcccaacaagcagatcgcggagtcggcc
aatagcagtagcccccagagctctgcggggggcaagcccgccatgtcttatgccagcgct
ctgcgggcccctccaaagcccaggccccctcctgagcaagccaagaagagtagcgaccct
ctgtctctcttccaggaactgagcctggggagctcatctggcagcaatggcttttactca
tattttaaataa
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